Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Foxc1Q61572 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.03□□□□□ -0.64
Foxc1Q61572 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Foxc1Q61572 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Foxc1Q61572 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Foxc1Q61572 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Foxc1Q61572 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Foxc1Q61572 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Foxc1Q61572 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Foxc1Q61572 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Foxc1Q61572 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Foxc1Q61572 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Foxc1Q61572 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Foxc1Q61572 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Foxc1Q61572 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Foxc1Q61572 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
Foxc1Q61572 Gm11779-201ENSMUST00000118541 368 ntBASIC11.02□□□□□ -0.65
Foxc1Q61572 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC11.02□□□□□ -0.65
Foxc1Q61572 Gm14140-201ENSMUST00000119999 995 ntBASIC11.02□□□□□ -0.65
Foxc1Q61572 Gm14126-201ENSMUST00000122345 395 ntBASIC11.02□□□□□ -0.65
Foxc1Q61572 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Foxc1Q61572 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC11.02□□□□□ -0.65
Foxc1Q61572 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Foxc1Q61572 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Foxc1Q61572 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Foxc1Q61572 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Foxc1Q61572 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Foxc1Q61572 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Foxc1Q61572 Gm7286-201ENSMUST00000182691 1007 ntBASIC11.02□□□□□ -0.65
Foxc1Q61572 Gm29013-201ENSMUST00000187431 237 ntBASIC11.02□□□□□ -0.65
Foxc1Q61572 AC125539.1-201ENSMUST00000227423 622 ntBASIC11.02□□□□□ -0.65
Foxc1Q61572 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Foxc1Q61572 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Foxc1Q61572 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Foxc1Q61572 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Foxc1Q61572 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Foxc1Q61572 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Foxc1Q61572 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Foxc1Q61572 Prkcz2-201ENSMUST00000206136 1756 ntBASIC11.02□□□□□ -0.65
Foxc1Q61572 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Foxc1Q61572 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Foxc1Q61572 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Foxc1Q61572 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Foxc1Q61572 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Foxc1Q61572 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Foxc1Q61572 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Foxc1Q61572 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Foxc1Q61572 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Foxc1Q61572 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Foxc1Q61572 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Foxc1Q61572 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Foxc1Q61572 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Foxc1Q61572 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Foxc1Q61572 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Foxc1Q61572 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Foxc1Q61572 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Foxc1Q61572 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Foxc1Q61572 Gm13333-201ENSMUST00000119424 781 ntBASIC11.01□□□□□ -0.65
Foxc1Q61572 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC11.01□□□□□ -0.65
Foxc1Q61572 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Foxc1Q61572 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC11.01□□□□□ -0.65
Foxc1Q61572 Gm18489-201ENSMUST00000172565 551 ntBASIC11.01□□□□□ -0.65
Foxc1Q61572 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC11.01□□□□□ -0.65
Foxc1Q61572 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC11.01□□□□□ -0.65
Foxc1Q61572 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Foxc1Q61572 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.01□□□□□ -0.65
Foxc1Q61572 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Foxc1Q61572 Gm29340-201ENSMUST00000188763 3854 ntBASIC11.01□□□□□ -0.65
Foxc1Q61572 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms