Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Sox17Q61473 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.02□□□□□ -0.17
Sox17Q61473 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox17Q61473 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox17Q61473 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox17Q61473 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sox17Q61473 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox17Q61473 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox17Q61473 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Sox17Q61473 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox17Q61473 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Sox17Q61473 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Sox17Q61473 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox17Q61473 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Sox17Q61473 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox17Q61473 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sox17Q61473 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox17Q61473 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox17Q61473 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox17Q61473 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Sox17Q61473 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Sox17Q61473 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox17Q61473 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox17Q61473 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Sox17Q61473 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox17Q61473 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Sox17Q61473 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Sox17Q61473 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Sox17Q61473 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Sox17Q61473 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox17Q61473 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Sox17Q61473 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox17Q61473 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox17Q61473 Gm11950-201ENSMUST00000121615 838 ntBASIC14.01□□□□□ -0.17
Sox17Q61473 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.01□□□□□ -0.17
Sox17Q61473 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox17Q61473 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sox17Q61473 Gm18622-201ENSMUST00000219361 595 ntBASIC14.01□□□□□ -0.17
Sox17Q61473 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sox17Q61473 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.01□□□□□ -0.17
Sox17Q61473 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox17Q61473 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox17Q61473 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sox17Q61473 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox17Q61473 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Sox17Q61473 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox17Q61473 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox17Q61473 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Sox17Q61473 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox17Q61473 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox17Q61473 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox17Q61473 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox17Q61473 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox17Q61473 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.01□□□□□ -0.17
Sox17Q61473 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sox17Q61473 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sox17Q61473 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox17Q61473 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox17Q61473 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox17Q61473 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Sox17Q61473 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Sox17Q61473 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox17Q61473 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox17Q61473 Gm37691-201ENSMUST00000192147 2573 ntBASIC14□□□□□ -0.17
Sox17Q61473 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Sox17Q61473 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Sox17Q61473 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox17Q61473 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sox17Q61473 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox17Q61473 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14□□□□□ -0.17
Sox17Q61473 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox17Q61473 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sox17Q61473 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox17Q61473 Gm6433-201ENSMUST00000118634 875 ntBASIC14□□□□□ -0.17
Sox17Q61473 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox17Q61473 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14□□□□□ -0.17
Sox17Q61473 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sox17Q61473 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox17Q61473 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Sox17Q61473 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox17Q61473 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Sox17Q61473 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sox17Q61473 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox17Q61473 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox17Q61473 Gm44645-201ENSMUST00000205492 1653 ntBASIC14□□□□□ -0.17
Sox17Q61473 Gm30238-201ENSMUST00000195528 2603 ntBASIC14□□□□□ -0.17
Sox17Q61473 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Sox17Q61473 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Sox17Q61473 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox17Q61473 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox17Q61473 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Sox17Q61473 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sox17Q61473 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox17Q61473 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14□□□□□ -0.17
Sox17Q61473 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox17Q61473 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox17Q61473 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox17Q61473 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Sox17Q61473 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox17Q61473 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms