Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.2■□□□□ 0.34
Foxd1Q61345 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Foxd1Q61345 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Foxd1Q61345 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxd1Q61345 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Foxd1Q61345 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxd1Q61345 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxd1Q61345 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.19■□□□□ 0.34
Foxd1Q61345 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.19■□□□□ 0.34
Foxd1Q61345 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Foxd1Q61345 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Foxd1Q61345 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
Foxd1Q61345 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.19■□□□□ 0.34
Foxd1Q61345 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxd1Q61345 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
Foxd1Q61345 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.19■□□□□ 0.34
Foxd1Q61345 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.19■□□□□ 0.34
Foxd1Q61345 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxd1Q61345 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxd1Q61345 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxd1Q61345 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Foxd1Q61345 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxd1Q61345 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.19■□□□□ 0.34
Foxd1Q61345 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Foxd1Q61345 AC114008.2-201ENSMUST00000227699 1347 ntBASIC17.19■□□□□ 0.34
Foxd1Q61345 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Foxd1Q61345 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Foxd1Q61345 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Foxd1Q61345 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Foxd1Q61345 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Foxd1Q61345 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Foxd1Q61345 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Foxd1Q61345 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Foxd1Q61345 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Foxd1Q61345 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Foxd1Q61345 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Foxd1Q61345 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC17.18■□□□□ 0.34
Foxd1Q61345 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Foxd1Q61345 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Foxd1Q61345 Asic1-205ENSMUST00000228185 1818 ntBASIC17.18■□□□□ 0.34
Foxd1Q61345 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Foxd1Q61345 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Foxd1Q61345 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Foxd1Q61345 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Foxd1Q61345 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Foxd1Q61345 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Foxd1Q61345 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Foxd1Q61345 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Foxd1Q61345 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.17■□□□□ 0.34
Foxd1Q61345 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxd1Q61345 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxd1Q61345 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxd1Q61345 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxd1Q61345 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.17■□□□□ 0.34
Foxd1Q61345 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Foxd1Q61345 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxd1Q61345 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxd1Q61345 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxd1Q61345 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxd1Q61345 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxd1Q61345 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxd1Q61345 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxd1Q61345 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxd1Q61345 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxd1Q61345 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC17.17■□□□□ 0.34
Foxd1Q61345 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.17■□□□□ 0.34
Foxd1Q61345 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC17.17■□□□□ 0.34
Foxd1Q61345 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC17.17■□□□□ 0.34
Foxd1Q61345 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC17.17■□□□□ 0.34
Foxd1Q61345 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Foxd1Q61345 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Foxd1Q61345 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Foxd1Q61345 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxd1Q61345 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Foxd1Q61345 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Foxd1Q61345 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxd1Q61345 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Foxd1Q61345 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxd1Q61345 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Foxd1Q61345 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Foxd1Q61345 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxd1Q61345 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Foxd1Q61345 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxd1Q61345 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.16■□□□□ 0.34
Foxd1Q61345 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Foxd1Q61345 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Foxd1Q61345 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxd1Q61345 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxd1Q61345 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Foxd1Q61345 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxd1Q61345 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Foxd1Q61345 Gm43068-201ENSMUST00000201095 1273 ntBASIC17.16■□□□□ 0.34
Foxd1Q61345 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.16■□□□□ 0.34
Foxd1Q61345 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
Foxd1Q61345 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC17.16■□□□□ 0.34
Foxd1Q61345 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.16■□□□□ 0.34
Foxd1Q61345 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxd1Q61345 Gm8399-201ENSMUST00000082300 1117 ntBASIC17.16■□□□□ 0.34
Foxd1Q61345 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Foxd1Q61345 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms