Protein–RNA interactions for Protein: Q61221

Hif1a, Hypoxia-inducible factor 1-alpha, mousemouse

Known RBP Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hif1aQ61221 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hif1aQ61221 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hif1aQ61221 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hif1aQ61221 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hif1aQ61221 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hif1aQ61221 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hif1aQ61221 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hif1aQ61221 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.1■□□□□ 0.01
Hif1aQ61221 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hif1aQ61221 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hif1aQ61221 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Hif1aQ61221 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Hif1aQ61221 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hif1aQ61221 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hif1aQ61221 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hif1aQ61221 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hif1aQ61221 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hif1aQ61221 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hif1aQ61221 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hif1aQ61221 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Hif1aQ61221 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hif1aQ61221 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Hif1aQ61221 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Hif1aQ61221 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.09■□□□□ 0.01
Hif1aQ61221 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Hif1aQ61221 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hif1aQ61221 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hif1aQ61221 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hif1aQ61221 Gm27867-201ENSMUST00000184778 125 ntBASIC15.09■□□□□ 0.01
Hif1aQ61221 Gm7506-201ENSMUST00000207758 815 ntBASIC15.09■□□□□ 0.01
Hif1aQ61221 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.09■□□□□ 0.01
Hif1aQ61221 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hif1aQ61221 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hif1aQ61221 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hif1aQ61221 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.09■□□□□ 0.01
Hif1aQ61221 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hif1aQ61221 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hif1aQ61221 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hif1aQ61221 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Hif1aQ61221 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hif1aQ61221 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hif1aQ61221 Carlr-201ENSMUST00000181515 2574 ntBASIC15.09■□□□□ 0.01
Hif1aQ61221 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hif1aQ61221 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hif1aQ61221 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Hif1aQ61221 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hif1aQ61221 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hif1aQ61221 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.09■□□□□ 0.01
Hif1aQ61221 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hif1aQ61221 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hif1aQ61221 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hif1aQ61221 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Hif1aQ61221 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hif1aQ61221 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Hif1aQ61221 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hif1aQ61221 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.08■□□□□ 0.01
Hif1aQ61221 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Hif1aQ61221 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hif1aQ61221 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0.01
Hif1aQ61221 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hif1aQ61221 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hif1aQ61221 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Hif1aQ61221 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hif1aQ61221 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Hif1aQ61221 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hif1aQ61221 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hif1aQ61221 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Hif1aQ61221 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hif1aQ61221 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Hif1aQ61221 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Hif1aQ61221 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Hif1aQ61221 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Hif1aQ61221 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Hif1aQ61221 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hif1aQ61221 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hif1aQ61221 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hif1aQ61221 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Hif1aQ61221 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.07■□□□□ 0
Hif1aQ61221 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.07■□□□□ 0
Hif1aQ61221 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hif1aQ61221 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Hif1aQ61221 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hif1aQ61221 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.07■□□□□ 0
Hif1aQ61221 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Hif1aQ61221 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hif1aQ61221 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.07■□□□□ 0
Hif1aQ61221 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hif1aQ61221 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hif1aQ61221 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Hif1aQ61221 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.07■□□□□ 0
Hif1aQ61221 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.07■□□□□ 0
Hif1aQ61221 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hif1aQ61221 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.07■□□□□ 0
Hif1aQ61221 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.07■□□□□ 0
Hif1aQ61221 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hif1aQ61221 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hif1aQ61221 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hif1aQ61221 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hif1aQ61221 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hif1aQ61221 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms