Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hcfc1Q61191 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Hcfc1Q61191 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hcfc1Q61191 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.4□□□□□ -0.42
Hcfc1Q61191 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hcfc1Q61191 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hcfc1Q61191 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hcfc1Q61191 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hcfc1Q61191 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hcfc1Q61191 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hcfc1Q61191 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Hcfc1Q61191 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Hcfc1Q61191 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.4□□□□□ -0.42
Hcfc1Q61191 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hcfc1Q61191 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hcfc1Q61191 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hcfc1Q61191 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.4□□□□□ -0.42
Hcfc1Q61191 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Hcfc1Q61191 Gm43630-201ENSMUST00000201550 776 ntBASIC12.4□□□□□ -0.42
Hcfc1Q61191 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hcfc1Q61191 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hcfc1Q61191 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hcfc1Q61191 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.4□□□□□ -0.42
Hcfc1Q61191 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Hcfc1Q61191 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Hcfc1Q61191 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Hcfc1Q61191 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Hcfc1Q61191 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Hcfc1Q61191 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.43
Hcfc1Q61191 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcfc1Q61191 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Gm27701-201ENSMUST00000184498 110 ntBASIC12.39□□□□□ -0.43
Hcfc1Q61191 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.39□□□□□ -0.43
Hcfc1Q61191 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcfc1Q61191 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Hcfc1Q61191 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hcfc1Q61191 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.38□□□□□ -0.43
Hcfc1Q61191 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hcfc1Q61191 Gm17150-201ENSMUST00000165577 381 ntBASIC12.38□□□□□ -0.43
Hcfc1Q61191 Gm10275-202ENSMUST00000168697 495 ntBASIC12.38□□□□□ -0.43
Hcfc1Q61191 Gm10766-202ENSMUST00000194123 606 ntBASIC12.38□□□□□ -0.43
Hcfc1Q61191 Gm5279-201ENSMUST00000199575 745 ntBASIC12.38□□□□□ -0.43
Hcfc1Q61191 Gm6916-202ENSMUST00000205523 195 ntBASIC12.38□□□□□ -0.43
Hcfc1Q61191 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.38□□□□□ -0.43
Hcfc1Q61191 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.38□□□□□ -0.43
Hcfc1Q61191 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.38□□□□□ -0.43
Hcfc1Q61191 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.38□□□□□ -0.43
Hcfc1Q61191 Gm10275-201ENSMUST00000092620 635 ntBASIC12.38□□□□□ -0.43
Hcfc1Q61191 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hcfc1Q61191 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hcfc1Q61191 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hcfc1Q61191 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hcfc1Q61191 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Hcfc1Q61191 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hcfc1Q61191 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hcfc1Q61191 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hcfc1Q61191 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hcfc1Q61191 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hcfc1Q61191 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hcfc1Q61191 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hcfc1Q61191 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hcfc1Q61191 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hcfc1Q61191 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Hcfc1Q61191 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms