Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Gm6912-201ENSMUST00000117218 544 ntBASIC16.27■□□□□ 0.2
Cln3Q61124 Gm8749-201ENSMUST00000117737 331 ntBASIC16.27■□□□□ 0.2
Cln3Q61124 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.27■□□□□ 0.2
Cln3Q61124 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cln3Q61124 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cln3Q61124 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cln3Q61124 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.27■□□□□ 0.2
Cln3Q61124 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cln3Q61124 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.27■□□□□ 0.2
Cln3Q61124 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cln3Q61124 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Cln3Q61124 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.27■□□□□ 0.2
Cln3Q61124 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Cln3Q61124 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Cln3Q61124 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cln3Q61124 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cln3Q61124 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cln3Q61124 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cln3Q61124 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cln3Q61124 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cln3Q61124 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cln3Q61124 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Cln3Q61124 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cln3Q61124 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cln3Q61124 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cln3Q61124 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Cln3Q61124 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cln3Q61124 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cln3Q61124 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cln3Q61124 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cln3Q61124 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cln3Q61124 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cln3Q61124 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cln3Q61124 Gm15653-201ENSMUST00000119247 907 ntBASIC16.26■□□□□ 0.19
Cln3Q61124 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cln3Q61124 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cln3Q61124 Gm42612-201ENSMUST00000197986 623 ntBASIC16.26■□□□□ 0.19
Cln3Q61124 Gm43170-201ENSMUST00000199827 612 ntBASIC16.26■□□□□ 0.19
Cln3Q61124 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.26■□□□□ 0.19
Cln3Q61124 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cln3Q61124 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cln3Q61124 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC16.26■□□□□ 0.19
Cln3Q61124 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cln3Q61124 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Cln3Q61124 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cln3Q61124 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.26■□□□□ 0.19
Cln3Q61124 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cln3Q61124 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cln3Q61124 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cln3Q61124 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cln3Q61124 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cln3Q61124 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cln3Q61124 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cln3Q61124 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cln3Q61124 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cln3Q61124 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cln3Q61124 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cln3Q61124 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cln3Q61124 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cln3Q61124 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.25■□□□□ 0.19
Cln3Q61124 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cln3Q61124 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cln3Q61124 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cln3Q61124 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cln3Q61124 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cln3Q61124 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cln3Q61124 Gm22189-201ENSMUST00000103822 86 ntBASIC16.25■□□□□ 0.19
Cln3Q61124 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.25■□□□□ 0.19
Cln3Q61124 Gm14042-201ENSMUST00000120139 833 ntBASIC16.25■□□□□ 0.19
Cln3Q61124 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.25■□□□□ 0.19
Cln3Q61124 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.25■□□□□ 0.19
Cln3Q61124 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.25■□□□□ 0.19
Cln3Q61124 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cln3Q61124 Gm37230-201ENSMUST00000194491 818 ntBASIC16.25■□□□□ 0.19
Cln3Q61124 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.25■□□□□ 0.19
Cln3Q61124 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.25■□□□□ 0.19
Cln3Q61124 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cln3Q61124 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC16.25■□□□□ 0.19
Cln3Q61124 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.25■□□□□ 0.19
Cln3Q61124 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cln3Q61124 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cln3Q61124 Gm20445-201ENSMUST00000061905 565 ntBASIC16.25■□□□□ 0.19
Cln3Q61124 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cln3Q61124 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Cln3Q61124 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cln3Q61124 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cln3Q61124 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cln3Q61124 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cln3Q61124 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cln3Q61124 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.25■□□□□ 0.19
Cln3Q61124 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cln3Q61124 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.24■□□□□ 0.19
Cln3Q61124 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.24■□□□□ 0.19
Cln3Q61124 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cln3Q61124 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cln3Q61124 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cln3Q61124 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cln3Q61124 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC16.24■□□□□ 0.19
Cln3Q61124 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.24■□□□□ 0.19
Cln3Q61124 Gm9522-201ENSMUST00000182394 926 ntBASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms