Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.5□□□□□ -0.09
Col12a1Q60847 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Col12a1Q60847 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col12a1Q60847 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.5□□□□□ -0.09
Col12a1Q60847 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col12a1Q60847 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col12a1Q60847 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col12a1Q60847 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col12a1Q60847 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Col12a1Q60847 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col12a1Q60847 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Col12a1Q60847 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col12a1Q60847 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.5□□□□□ -0.09
Col12a1Q60847 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Col12a1Q60847 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.5□□□□□ -0.09
Col12a1Q60847 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col12a1Q60847 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col12a1Q60847 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col12a1Q60847 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col12a1Q60847 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col12a1Q60847 BC001981-202ENSMUST00000191393 1545 ntBASIC14.5□□□□□ -0.09
Col12a1Q60847 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col12a1Q60847 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col12a1Q60847 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Col12a1Q60847 Gm27847-201ENSMUST00000183711 107 ntBASIC14.5□□□□□ -0.09
Col12a1Q60847 Gm27375-201ENSMUST00000183799 107 ntBASIC14.5□□□□□ -0.09
Col12a1Q60847 Gm19184-201ENSMUST00000196798 928 ntBASIC14.5□□□□□ -0.09
Col12a1Q60847 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col12a1Q60847 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col12a1Q60847 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col12a1Q60847 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col12a1Q60847 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col12a1Q60847 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col12a1Q60847 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col12a1Q60847 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col12a1Q60847 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col12a1Q60847 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
Col12a1Q60847 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col12a1Q60847 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col12a1Q60847 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Col12a1Q60847 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col12a1Q60847 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.49□□□□□ -0.09
Col12a1Q60847 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col12a1Q60847 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Col12a1Q60847 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.49□□□□□ -0.09
Col12a1Q60847 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.49□□□□□ -0.09
Col12a1Q60847 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col12a1Q60847 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col12a1Q60847 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col12a1Q60847 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col12a1Q60847 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col12a1Q60847 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col12a1Q60847 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col12a1Q60847 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col12a1Q60847 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col12a1Q60847 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Col12a1Q60847 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col12a1Q60847 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col12a1Q60847 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col12a1Q60847 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.49□□□□□ -0.09
Col12a1Q60847 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Col12a1Q60847 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.49□□□□□ -0.09
Col12a1Q60847 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col12a1Q60847 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col12a1Q60847 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col12a1Q60847 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col12a1Q60847 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col12a1Q60847 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.49□□□□□ -0.09
Col12a1Q60847 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col12a1Q60847 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col12a1Q60847 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.48□□□□□ -0.09
Col12a1Q60847 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Col12a1Q60847 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.48□□□□□ -0.09
Col12a1Q60847 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col12a1Q60847 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col12a1Q60847 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col12a1Q60847 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col12a1Q60847 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.48□□□□□ -0.09
Col12a1Q60847 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Col12a1Q60847 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.48□□□□□ -0.09
Col12a1Q60847 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col12a1Q60847 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col12a1Q60847 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col12a1Q60847 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC14.48□□□□□ -0.09
Col12a1Q60847 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Col12a1Q60847 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col12a1Q60847 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col12a1Q60847 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col12a1Q60847 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col12a1Q60847 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.48□□□□□ -0.09
Col12a1Q60847 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col12a1Q60847 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col12a1Q60847 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col12a1Q60847 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Col12a1Q60847 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col12a1Q60847 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col12a1Q60847 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col12a1Q60847 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col12a1Q60847 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col12a1Q60847 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms