Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfaip3Q60769 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfaip3Q60769 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfaip3Q60769 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfaip3Q60769 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.03□□□□□ -0.16
Tnfaip3Q60769 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Tnfaip3Q60769 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfaip3Q60769 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfaip3Q60769 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfaip3Q60769 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.02□□□□□ -0.16
Tnfaip3Q60769 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfaip3Q60769 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfaip3Q60769 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfaip3Q60769 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfaip3Q60769 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfaip3Q60769 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfaip3Q60769 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Tnfaip3Q60769 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfaip3Q60769 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Tnfaip3Q60769 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.02□□□□□ -0.16
Tnfaip3Q60769 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfaip3Q60769 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.02□□□□□ -0.17
Tnfaip3Q60769 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfaip3Q60769 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfaip3Q60769 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.02□□□□□ -0.17
Tnfaip3Q60769 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.02□□□□□ -0.17
Tnfaip3Q60769 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Tnfaip3Q60769 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.02□□□□□ -0.17
Tnfaip3Q60769 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfaip3Q60769 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfaip3Q60769 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfaip3Q60769 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.02□□□□□ -0.17
Tnfaip3Q60769 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfaip3Q60769 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfaip3Q60769 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfaip3Q60769 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfaip3Q60769 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfaip3Q60769 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Tnfaip3Q60769 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfaip3Q60769 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfaip3Q60769 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfaip3Q60769 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfaip3Q60769 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Tnfaip3Q60769 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfaip3Q60769 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfaip3Q60769 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Tnfaip3Q60769 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfaip3Q60769 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfaip3Q60769 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.01□□□□□ -0.17
Tnfaip3Q60769 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Tnfaip3Q60769 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.01□□□□□ -0.17
Tnfaip3Q60769 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.01□□□□□ -0.17
Tnfaip3Q60769 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.01□□□□□ -0.17
Tnfaip3Q60769 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfaip3Q60769 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfaip3Q60769 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfaip3Q60769 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.01□□□□□ -0.17
Tnfaip3Q60769 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Tnfaip3Q60769 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfaip3Q60769 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfaip3Q60769 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfaip3Q60769 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfaip3Q60769 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfaip3Q60769 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfaip3Q60769 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Tnfaip3Q60769 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.01□□□□□ -0.17
Tnfaip3Q60769 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tnfaip3Q60769 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfaip3Q60769 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfaip3Q60769 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfaip3Q60769 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tnfaip3Q60769 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14□□□□□ -0.17
Tnfaip3Q60769 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfaip3Q60769 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfaip3Q60769 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfaip3Q60769 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfaip3Q60769 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfaip3Q60769 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfaip3Q60769 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Tnfaip3Q60769 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfaip3Q60769 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfaip3Q60769 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Tnfaip3Q60769 Gm15593-201ENSMUST00000122085 1008 ntBASIC14□□□□□ -0.17
Tnfaip3Q60769 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tnfaip3Q60769 Gm16026-204ENSMUST00000162652 683 ntBASIC14□□□□□ -0.17
Tnfaip3Q60769 Gm20553-201ENSMUST00000204205 844 ntBASIC14□□□□□ -0.17
Tnfaip3Q60769 AC164567.1-201ENSMUST00000219185 960 ntBASIC14□□□□□ -0.17
Tnfaip3Q60769 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14□□□□□ -0.17
Tnfaip3Q60769 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfaip3Q60769 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tnfaip3Q60769 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfaip3Q60769 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfaip3Q60769 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Tnfaip3Q60769 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfaip3Q60769 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfaip3Q60769 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Tnfaip3Q60769 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfaip3Q60769 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfaip3Q60769 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfaip3Q60769 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms