Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps54Q5SPW0 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.9■□□□□ 0.46
Vps54Q5SPW0 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Vps54Q5SPW0 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps54Q5SPW0 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps54Q5SPW0 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps54Q5SPW0 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.9■□□□□ 0.46
Vps54Q5SPW0 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps54Q5SPW0 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps54Q5SPW0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps54Q5SPW0 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Vps54Q5SPW0 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.89■□□□□ 0.46
Vps54Q5SPW0 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.89■□□□□ 0.46
Vps54Q5SPW0 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Vps54Q5SPW0 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Vps54Q5SPW0 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Vps54Q5SPW0 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Vps54Q5SPW0 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps54Q5SPW0 Gm18057-201ENSMUST00000208220 503 ntBASIC17.89■□□□□ 0.45
Vps54Q5SPW0 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps54Q5SPW0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Vps54Q5SPW0 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps54Q5SPW0 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps54Q5SPW0 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.89■□□□□ 0.45
Vps54Q5SPW0 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps54Q5SPW0 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps54Q5SPW0 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps54Q5SPW0 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.89■□□□□ 0.45
Vps54Q5SPW0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps54Q5SPW0 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Vps54Q5SPW0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Vps54Q5SPW0 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps54Q5SPW0 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.88■□□□□ 0.45
Vps54Q5SPW0 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.88■□□□□ 0.45
Vps54Q5SPW0 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps54Q5SPW0 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.88■□□□□ 0.45
Vps54Q5SPW0 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps54Q5SPW0 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.88■□□□□ 0.45
Vps54Q5SPW0 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.88■□□□□ 0.45
Vps54Q5SPW0 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Vps54Q5SPW0 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.88■□□□□ 0.45
Vps54Q5SPW0 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.88■□□□□ 0.45
Vps54Q5SPW0 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps54Q5SPW0 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps54Q5SPW0 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps54Q5SPW0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vps54Q5SPW0 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps54Q5SPW0 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps54Q5SPW0 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vps54Q5SPW0 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps54Q5SPW0 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vps54Q5SPW0 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps54Q5SPW0 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps54Q5SPW0 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps54Q5SPW0 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.88■□□□□ 0.45
Vps54Q5SPW0 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vps54Q5SPW0 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps54Q5SPW0 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps54Q5SPW0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vps54Q5SPW0 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps54Q5SPW0 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vps54Q5SPW0 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps54Q5SPW0 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Vps54Q5SPW0 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Vps54Q5SPW0 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps54Q5SPW0 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Vps54Q5SPW0 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.87■□□□□ 0.45
Vps54Q5SPW0 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vps54Q5SPW0 Mir6990-201ENSMUST00000183724 91 ntBASIC17.87■□□□□ 0.45
Vps54Q5SPW0 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.87■□□□□ 0.45
Vps54Q5SPW0 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps54Q5SPW0 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.87■□□□□ 0.45
Vps54Q5SPW0 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps54Q5SPW0 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps54Q5SPW0 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps54Q5SPW0 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.87■□□□□ 0.45
Vps54Q5SPW0 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps54Q5SPW0 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps54Q5SPW0 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps54Q5SPW0 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
Vps54Q5SPW0 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vps54Q5SPW0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vps54Q5SPW0 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps54Q5SPW0 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Vps54Q5SPW0 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps54Q5SPW0 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps54Q5SPW0 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps54Q5SPW0 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps54Q5SPW0 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps54Q5SPW0 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.86■□□□□ 0.45
Vps54Q5SPW0 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps54Q5SPW0 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps54Q5SPW0 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.86■□□□□ 0.45
Vps54Q5SPW0 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps54Q5SPW0 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.86■□□□□ 0.45
Vps54Q5SPW0 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.86■□□□□ 0.45
Vps54Q5SPW0 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps54Q5SPW0 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps54Q5SPW0 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.86■□□□□ 0.45
Vps54Q5SPW0 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms