Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav2Q5R1I9 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav2Q5R1I9 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav2Q5R1I9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Trav2Q5R1I9 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav2Q5R1I9 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav2Q5R1I9 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav2Q5R1I9 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav2Q5R1I9 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav2Q5R1I9 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav2Q5R1I9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav2Q5R1I9 Gm16011-201ENSMUST00000121567 2662 ntBASIC11.91□□□□□ -0.5
Trav2Q5R1I9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Trav2Q5R1I9 Gm9385-201ENSMUST00000117563 472 ntBASIC11.91□□□□□ -0.5
Trav2Q5R1I9 Gm12017-201ENSMUST00000122453 1003 ntBASIC11.91□□□□□ -0.5
Trav2Q5R1I9 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav2Q5R1I9 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.91□□□□□ -0.5
Trav2Q5R1I9 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.91□□□□□ -0.5
Trav2Q5R1I9 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav2Q5R1I9 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav2Q5R1I9 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC11.91□□□□□ -0.5
Trav2Q5R1I9 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.91□□□□□ -0.5
Trav2Q5R1I9 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.91□□□□□ -0.5
Trav2Q5R1I9 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav2Q5R1I9 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav2Q5R1I9 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.91□□□□□ -0.5
Trav2Q5R1I9 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav2Q5R1I9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav2Q5R1I9 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav2Q5R1I9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Trav2Q5R1I9 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav2Q5R1I9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav2Q5R1I9 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav2Q5R1I9 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.91□□□□□ -0.5
Trav2Q5R1I9 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav2Q5R1I9 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav2Q5R1I9 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav2Q5R1I9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav2Q5R1I9 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav2Q5R1I9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav2Q5R1I9 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
Trav2Q5R1I9 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav2Q5R1I9 Gm13365-201ENSMUST00000121188 973 ntBASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms