Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Gm25990-201ENSMUST00000102440 86 ntBASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Gm7222-201ENSMUST00000117512 906 ntBASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Gm7787-201ENSMUST00000216858 688 ntBASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav6-3Q5R1E6 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Gm11764-201ENSMUST00000120221 623 ntBASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 AC164567.1-201ENSMUST00000219185 960 ntBASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Spr-ps1-201ENSMUST00000089584 605 ntBASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-3Q5R1E6 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC11.96□□□□□ -0.49
Trav6-3Q5R1E6 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Trav6-3Q5R1E6 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-3Q5R1E6 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-3Q5R1E6 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-3Q5R1E6 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trav6-3Q5R1E6 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-3Q5R1E6 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-3Q5R1E6 Gm37812-201ENSMUST00000195216 2475 ntBASIC11.96□□□□□ -0.49
Trav6-3Q5R1E6 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6-3Q5R1E6 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav6-3Q5R1E6 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms