Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC11.63□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gm45328-201ENSMUST00000210942 917 ntBASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 CT009510.1-201ENSMUST00000227972 270 ntBASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Rprl3-201ENSMUST00000157400 290 ntBASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Gm18032-201ENSMUST00000222541 538 ntBASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav15-1-dv6-1Q5R1D2 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms