Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-2Q5R1B6 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-2Q5R1B6 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-2Q5R1B6 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-2Q5R1B6 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-2Q5R1B6 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav8d-2Q5R1B6 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8d-2Q5R1B6 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8d-2Q5R1B6 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav8d-2Q5R1B6 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8d-2Q5R1B6 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8d-2Q5R1B6 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8d-2Q5R1B6 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav8d-2Q5R1B6 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trav8d-2Q5R1B6 Gm13464-201ENSMUST00000119418 935 ntBASIC14.44□□□□□ -0.1
Trav8d-2Q5R1B6 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.44□□□□□ -0.1
Trav8d-2Q5R1B6 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.44□□□□□ -0.1
Trav8d-2Q5R1B6 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Trav8d-2Q5R1B6 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Trav8d-2Q5R1B6 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8d-2Q5R1B6 Gm17150-201ENSMUST00000165577 381 ntBASIC14.44□□□□□ -0.1
Trav8d-2Q5R1B6 Gm9002-201ENSMUST00000178437 499 ntBASIC14.44□□□□□ -0.1
Trav8d-2Q5R1B6 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav8d-2Q5R1B6 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.44□□□□□ -0.1
Trav8d-2Q5R1B6 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8d-2Q5R1B6 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8d-2Q5R1B6 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8d-2Q5R1B6 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8d-2Q5R1B6 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8d-2Q5R1B6 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8d-2Q5R1B6 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav8d-2Q5R1B6 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav8d-2Q5R1B6 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-2Q5R1B6 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.43□□□□□ -0.1
Trav8d-2Q5R1B6 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav8d-2Q5R1B6 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-2Q5R1B6 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-2Q5R1B6 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-2Q5R1B6 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trav8d-2Q5R1B6 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-2Q5R1B6 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-2Q5R1B6 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-2Q5R1B6 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-2Q5R1B6 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-2Q5R1B6 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Trav8d-2Q5R1B6 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav8d-2Q5R1B6 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.43□□□□□ -0.1
Trav8d-2Q5R1B6 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav8d-2Q5R1B6 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-2Q5R1B6 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.43□□□□□ -0.1
Trav8d-2Q5R1B6 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-2Q5R1B6 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-2Q5R1B6 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-2Q5R1B6 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-2Q5R1B6 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-2Q5R1B6 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav8d-2Q5R1B6 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav8d-2Q5R1B6 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Trav8d-2Q5R1B6 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 Gm9182-201ENSMUST00000217829 639 ntBASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav8d-2Q5R1B6 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-2Q5R1B6 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav8d-2Q5R1B6 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-2Q5R1B6 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8d-2Q5R1B6 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 120.5 ms