Protein–RNA interactions for Protein: Q5R1A3

Trdv4, T cell receptor delta variable 4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv4Q5R1A3 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trdv4Q5R1A3 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv4Q5R1A3 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv4Q5R1A3 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv4Q5R1A3 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv4Q5R1A3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv4Q5R1A3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.32□□□□□ -0.44
Trdv4Q5R1A3 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.32□□□□□ -0.44
Trdv4Q5R1A3 Gm27628-201ENSMUST00000184911 107 ntBASIC12.32□□□□□ -0.44
Trdv4Q5R1A3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.32□□□□□ -0.44
Trdv4Q5R1A3 Gm43767-201ENSMUST00000198933 381 ntBASIC12.32□□□□□ -0.44
Trdv4Q5R1A3 Gm2651-201ENSMUST00000203560 838 ntBASIC12.32□□□□□ -0.44
Trdv4Q5R1A3 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv4Q5R1A3 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trdv4Q5R1A3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv4Q5R1A3 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv4Q5R1A3 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv4Q5R1A3 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv4Q5R1A3 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv4Q5R1A3 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv4Q5R1A3 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trdv4Q5R1A3 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.32□□□□□ -0.44
Trdv4Q5R1A3 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv4Q5R1A3 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv4Q5R1A3 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv4Q5R1A3 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.32□□□□□ -0.44
Trdv4Q5R1A3 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trdv4Q5R1A3 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 Gm12350-201ENSMUST00000121208 462 ntBASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 Mzt1-203ENSMUST00000227948 952 ntBASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trdv4Q5R1A3 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 Gm23547-201ENSMUST00000158210 271 ntBASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trdv4Q5R1A3 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms