Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps13aQ5H8C4 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps13aQ5H8C4 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps13aQ5H8C4 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Vps13aQ5H8C4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vps13aQ5H8C4 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vps13aQ5H8C4 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vps13aQ5H8C4 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps13aQ5H8C4 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vps13aQ5H8C4 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.56□□□□□ -0.08
Vps13aQ5H8C4 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Vps13aQ5H8C4 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vps13aQ5H8C4 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Vps13aQ5H8C4 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps13aQ5H8C4 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vps13aQ5H8C4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vps13aQ5H8C4 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps13aQ5H8C4 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps13aQ5H8C4 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.56□□□□□ -0.08
Vps13aQ5H8C4 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.56□□□□□ -0.08
Vps13aQ5H8C4 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.56□□□□□ -0.08
Vps13aQ5H8C4 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.56□□□□□ -0.08
Vps13aQ5H8C4 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps13aQ5H8C4 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps13aQ5H8C4 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vps13aQ5H8C4 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Vps13aQ5H8C4 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.56□□□□□ -0.08
Vps13aQ5H8C4 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps13aQ5H8C4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Vps13aQ5H8C4 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps13aQ5H8C4 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps13aQ5H8C4 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Vps13aQ5H8C4 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.55□□□□□ -0.08
Vps13aQ5H8C4 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps13aQ5H8C4 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps13aQ5H8C4 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps13aQ5H8C4 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps13aQ5H8C4 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps13aQ5H8C4 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps13aQ5H8C4 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Vps13aQ5H8C4 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps13aQ5H8C4 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vps13aQ5H8C4 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps13aQ5H8C4 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Vps13aQ5H8C4 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.55□□□□□ -0.08
Vps13aQ5H8C4 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps13aQ5H8C4 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Vps13aQ5H8C4 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Vps13aQ5H8C4 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Vps13aQ5H8C4 Gm27243-201ENSMUST00000183964 521 ntBASIC14.55□□□□□ -0.08
Vps13aQ5H8C4 Gm17794-201ENSMUST00000220252 955 ntBASIC14.55□□□□□ -0.08
Vps13aQ5H8C4 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vps13aQ5H8C4 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Vps13aQ5H8C4 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.55□□□□□ -0.08
Vps13aQ5H8C4 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vps13aQ5H8C4 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps13aQ5H8C4 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vps13aQ5H8C4 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps13aQ5H8C4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps13aQ5H8C4 Gm43118-201ENSMUST00000199149 775 ntBASIC14.55□□□□□ -0.08
Vps13aQ5H8C4 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps13aQ5H8C4 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Vps13aQ5H8C4 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps13aQ5H8C4 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps13aQ5H8C4 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps13aQ5H8C4 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps13aQ5H8C4 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps13aQ5H8C4 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps13aQ5H8C4 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps13aQ5H8C4 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps13aQ5H8C4 Gm8463-201ENSMUST00000208573 613 ntBASIC14.54□□□□□ -0.08
Vps13aQ5H8C4 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps13aQ5H8C4 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps13aQ5H8C4 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Vps13aQ5H8C4 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.54□□□□□ -0.08
Vps13aQ5H8C4 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps13aQ5H8C4 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps13aQ5H8C4 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps13aQ5H8C4 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps13aQ5H8C4 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.54□□□□□ -0.08
Vps13aQ5H8C4 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps13aQ5H8C4 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps13aQ5H8C4 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps13aQ5H8C4 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.54□□□□□ -0.08
Vps13aQ5H8C4 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps13aQ5H8C4 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps13aQ5H8C4 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vps13aQ5H8C4 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps13aQ5H8C4 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps13aQ5H8C4 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps13aQ5H8C4 Gm15782-201ENSMUST00000121073 445 ntBASIC14.53□□□□□ -0.08
Vps13aQ5H8C4 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps13aQ5H8C4 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC14.53□□□□□ -0.08
Vps13aQ5H8C4 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Vps13aQ5H8C4 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vps13aQ5H8C4 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.53□□□□□ -0.08
Vps13aQ5H8C4 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps13aQ5H8C4 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps13aQ5H8C4 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps13aQ5H8C4 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms