Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Urb1Q571H0 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Urb1Q571H0 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Urb1Q571H0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Urb1Q571H0 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Urb1Q571H0 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Urb1Q571H0 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Urb1Q571H0 Gm10499-201ENSMUST00000174094 934 ntBASIC13.74□□□□□ -0.21
Urb1Q571H0 Gm25144-201ENSMUST00000179561 110 ntBASIC13.74□□□□□ -0.21
Urb1Q571H0 Gm25352-201ENSMUST00000179815 110 ntBASIC13.74□□□□□ -0.21
Urb1Q571H0 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Urb1Q571H0 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.74□□□□□ -0.21
Urb1Q571H0 Gm43703-201ENSMUST00000200523 763 ntBASIC13.74□□□□□ -0.21
Urb1Q571H0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Urb1Q571H0 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Urb1Q571H0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Urb1Q571H0 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Urb1Q571H0 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Urb1Q571H0 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Urb1Q571H0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Urb1Q571H0 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Urb1Q571H0 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Urb1Q571H0 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Urb1Q571H0 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Urb1Q571H0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Urb1Q571H0 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Urb1Q571H0 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Urb1Q571H0 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Urb1Q571H0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Urb1Q571H0 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Urb1Q571H0 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Urb1Q571H0 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Urb1Q571H0 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Urb1Q571H0 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Urb1Q571H0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Urb1Q571H0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Urb1Q571H0 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Urb1Q571H0 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Urb1Q571H0 Gm9824-201ENSMUST00000178707 561 ntBASIC13.73□□□□□ -0.21
Urb1Q571H0 Gm18766-201ENSMUST00000189811 808 ntBASIC13.73□□□□□ -0.21
Urb1Q571H0 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Urb1Q571H0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Urb1Q571H0 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Urb1Q571H0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Urb1Q571H0 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Urb1Q571H0 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.73□□□□□ -0.21
Urb1Q571H0 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Urb1Q571H0 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.73□□□□□ -0.21
Urb1Q571H0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.73□□□□□ -0.21
Urb1Q571H0 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Urb1Q571H0 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Urb1Q571H0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.73□□□□□ -0.21
Urb1Q571H0 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Urb1Q571H0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Urb1Q571H0 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Urb1Q571H0 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.73□□□□□ -0.21
Urb1Q571H0 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Urb1Q571H0 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Urb1Q571H0 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Urb1Q571H0 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Urb1Q571H0 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Urb1Q571H0 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Urb1Q571H0 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Urb1Q571H0 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.72□□□□□ -0.21
Urb1Q571H0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Urb1Q571H0 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Urb1Q571H0 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Urb1Q571H0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Urb1Q571H0 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Urb1Q571H0 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Urb1Q571H0 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Urb1Q571H0 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Urb1Q571H0 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Urb1Q571H0 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Urb1Q571H0 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Urb1Q571H0 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Urb1Q571H0 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Urb1Q571H0 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Urb1Q571H0 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Urb1Q571H0 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.72□□□□□ -0.21
Urb1Q571H0 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Urb1Q571H0 Gm9063-201ENSMUST00000223299 582 ntBASIC13.72□□□□□ -0.21
Urb1Q571H0 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Urb1Q571H0 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Urb1Q571H0 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Urb1Q571H0 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Urb1Q571H0 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Urb1Q571H0 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Urb1Q571H0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Urb1Q571H0 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Urb1Q571H0 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.71□□□□□ -0.21
Urb1Q571H0 Gm14767-201ENSMUST00000121559 586 ntBASIC13.71□□□□□ -0.21
Urb1Q571H0 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Urb1Q571H0 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.71□□□□□ -0.21
Urb1Q571H0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Urb1Q571H0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Urb1Q571H0 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Urb1Q571H0 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Urb1Q571H0 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Urb1Q571H0 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms