Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Trim80Q3V061 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Trim80Q3V061 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trim80Q3V061 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.44■□□□□ 0.06
Trim80Q3V061 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim80Q3V061 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim80Q3V061 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trim80Q3V061 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.44■□□□□ 0.06
Trim80Q3V061 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Trim80Q3V061 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.44■□□□□ 0.06
Trim80Q3V061 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trim80Q3V061 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trim80Q3V061 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim80Q3V061 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trim80Q3V061 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trim80Q3V061 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim80Q3V061 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.44■□□□□ 0.06
Trim80Q3V061 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.44■□□□□ 0.06
Trim80Q3V061 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.44■□□□□ 0.06
Trim80Q3V061 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.44■□□□□ 0.06
Trim80Q3V061 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim80Q3V061 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.44■□□□□ 0.06
Trim80Q3V061 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trim80Q3V061 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trim80Q3V061 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim80Q3V061 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim80Q3V061 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.43■□□□□ 0.06
Trim80Q3V061 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Trim80Q3V061 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trim80Q3V061 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim80Q3V061 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim80Q3V061 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim80Q3V061 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.43■□□□□ 0.06
Trim80Q3V061 Gm2651-201ENSMUST00000203560 838 ntBASIC15.43■□□□□ 0.06
Trim80Q3V061 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim80Q3V061 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.43■□□□□ 0.06
Trim80Q3V061 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim80Q3V061 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.43■□□□□ 0.06
Trim80Q3V061 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim80Q3V061 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim80Q3V061 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim80Q3V061 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim80Q3V061 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trim80Q3V061 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim80Q3V061 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim80Q3V061 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trim80Q3V061 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim80Q3V061 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim80Q3V061 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trim80Q3V061 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim80Q3V061 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim80Q3V061 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim80Q3V061 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim80Q3V061 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim80Q3V061 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim80Q3V061 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim80Q3V061 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim80Q3V061 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
Trim80Q3V061 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim80Q3V061 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim80Q3V061 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim80Q3V061 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim80Q3V061 Gm12134-201ENSMUST00000122109 520 ntBASIC15.42■□□□□ 0.06
Trim80Q3V061 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim80Q3V061 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim80Q3V061 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim80Q3V061 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trim80Q3V061 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim80Q3V061 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim80Q3V061 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim80Q3V061 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim80Q3V061 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim80Q3V061 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.42■□□□□ 0.06
Trim80Q3V061 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim80Q3V061 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim80Q3V061 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim80Q3V061 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trim80Q3V061 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim80Q3V061 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim80Q3V061 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trim80Q3V061 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim80Q3V061 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim80Q3V061 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim80Q3V061 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim80Q3V061 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim80Q3V061 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim80Q3V061 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim80Q3V061 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim80Q3V061 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim80Q3V061 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim80Q3V061 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim80Q3V061 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim80Q3V061 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim80Q3V061 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim80Q3V061 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.41■□□□□ 0.06
Trim80Q3V061 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim80Q3V061 Gm6257-201ENSMUST00000163864 910 ntBASIC15.41■□□□□ 0.06
Trim80Q3V061 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.41■□□□□ 0.06
Trim80Q3V061 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.41■□□□□ 0.06
Trim80Q3V061 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms