Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Q3KNL4 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Q3KNL4 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Q3KNL4 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Q3KNL4 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Q3KNL4 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Q3KNL4 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Q3KNL4 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Q3KNL4 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Q3KNL4 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.67□□□□□ -0.06
Q3KNL4 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.67□□□□□ -0.06
Q3KNL4 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Q3KNL4 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Q3KNL4 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.67□□□□□ -0.06
Q3KNL4 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Q3KNL4 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Q3KNL4 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Q3KNL4 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Q3KNL4 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Q3KNL4 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Q3KNL4 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Q3KNL4 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Q3KNL4 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Q3KNL4 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Q3KNL4 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Q3KNL4 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Q3KNL4 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Q3KNL4 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Q3KNL4 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Q3KNL4 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Q3KNL4 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Q3KNL4 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Q3KNL4 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Q3KNL4 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Q3KNL4 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Q3KNL4 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Q3KNL4 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Q3KNL4 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.66□□□□□ -0.06
Q3KNL4 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.66□□□□□ -0.06
Q3KNL4 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.66□□□□□ -0.06
Q3KNL4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Q3KNL4 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Q3KNL4 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Q3KNL4 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.66□□□□□ -0.06
Q3KNL4 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.66□□□□□ -0.06
Q3KNL4 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Q3KNL4 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Q3KNL4 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Q3KNL4 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Q3KNL4 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Q3KNL4 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Q3KNL4 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Q3KNL4 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Q3KNL4 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Q3KNL4 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Q3KNL4 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Q3KNL4 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Q3KNL4 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.65□□□□□ -0.06
Q3KNL4 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Q3KNL4 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.65□□□□□ -0.06
Q3KNL4 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Q3KNL4 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Q3KNL4 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Q3KNL4 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Q3KNL4 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Q3KNL4 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Q3KNL4 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Q3KNL4 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Q3KNL4 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Q3KNL4 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Q3KNL4 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Q3KNL4 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Q3KNL4 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.65□□□□□ -0.06
Q3KNL4 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Q3KNL4 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Q3KNL4 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Q3KNL4 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Q3KNL4 Gm11780-201ENSMUST00000136880 516 ntBASIC14.65□□□□□ -0.06
Q3KNL4 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Q3KNL4 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.65□□□□□ -0.06
Q3KNL4 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.65□□□□□ -0.06
Q3KNL4 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Q3KNL4 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Q3KNL4 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.65□□□□□ -0.06
Q3KNL4 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.65□□□□□ -0.06
Q3KNL4 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Q3KNL4 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Q3KNL4 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.65□□□□□ -0.06
Q3KNL4 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.65□□□□□ -0.06
Q3KNL4 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
Q3KNL4 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Q3KNL4 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Q3KNL4 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Q3KNL4 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Q3KNL4 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Q3KNL4 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Q3KNL4 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Q3KNL4 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Q3KNL4 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Q3KNL4 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms