Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rab42Q0PD08 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rab42Q0PD08 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rab42Q0PD08 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rab42Q0PD08 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rab42Q0PD08 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.24□□□□□ -0.29
Rab42Q0PD08 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rab42Q0PD08 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rab42Q0PD08 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.23□□□□□ -0.29
Rab42Q0PD08 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Rab42Q0PD08 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Rab42Q0PD08 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rab42Q0PD08 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Rab42Q0PD08 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rab42Q0PD08 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rab42Q0PD08 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rab42Q0PD08 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rab42Q0PD08 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.23□□□□□ -0.29
Rab42Q0PD08 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rab42Q0PD08 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.23□□□□□ -0.29
Rab42Q0PD08 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rab42Q0PD08 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rab42Q0PD08 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rab42Q0PD08 Gm13312-201ENSMUST00000119631 718 ntBASIC13.23□□□□□ -0.29
Rab42Q0PD08 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.23□□□□□ -0.29
Rab42Q0PD08 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.23□□□□□ -0.29
Rab42Q0PD08 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rab42Q0PD08 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rab42Q0PD08 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rab42Q0PD08 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rab42Q0PD08 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Rab42Q0PD08 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rab42Q0PD08 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.23□□□□□ -0.29
Rab42Q0PD08 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rab42Q0PD08 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.23□□□□□ -0.29
Rab42Q0PD08 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rab42Q0PD08 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rab42Q0PD08 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Rab42Q0PD08 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rab42Q0PD08 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rab42Q0PD08 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rab42Q0PD08 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rab42Q0PD08 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rab42Q0PD08 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rab42Q0PD08 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Rab42Q0PD08 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rab42Q0PD08 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.22□□□□□ -0.29
Rab42Q0PD08 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rab42Q0PD08 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rab42Q0PD08 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Rab42Q0PD08 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.22□□□□□ -0.29
Rab42Q0PD08 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rab42Q0PD08 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rab42Q0PD08 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rab42Q0PD08 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rab42Q0PD08 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Rab42Q0PD08 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rab42Q0PD08 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rab42Q0PD08 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Rab42Q0PD08 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rab42Q0PD08 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.22□□□□□ -0.29
Rab42Q0PD08 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rab42Q0PD08 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rab42Q0PD08 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Rab42Q0PD08 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.22□□□□□ -0.29
Rab42Q0PD08 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rab42Q0PD08 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rab42Q0PD08 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Rab42Q0PD08 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.21□□□□□ -0.29
Rab42Q0PD08 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rab42Q0PD08 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab42Q0PD08 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rab42Q0PD08 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab42Q0PD08 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab42Q0PD08 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.21□□□□□ -0.29
Rab42Q0PD08 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab42Q0PD08 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab42Q0PD08 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rab42Q0PD08 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab42Q0PD08 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.21□□□□□ -0.29
Rab42Q0PD08 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.21□□□□□ -0.29
Rab42Q0PD08 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.21□□□□□ -0.29
Rab42Q0PD08 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rab42Q0PD08 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rab42Q0PD08 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab42Q0PD08 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab42Q0PD08 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab42Q0PD08 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab42Q0PD08 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab42Q0PD08 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab42Q0PD08 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.21□□□□□ -0.29
Rab42Q0PD08 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.21□□□□□ -0.29
Rab42Q0PD08 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.21□□□□□ -0.3
Rab42Q0PD08 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rab42Q0PD08 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rab42Q0PD08 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.21□□□□□ -0.3
Rab42Q0PD08 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rab42Q0PD08 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab42Q0PD08 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Rab42Q0PD08 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms