Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GabpaQ00422 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GabpaQ00422 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.9■□□□□ 0.3
GabpaQ00422 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GabpaQ00422 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GabpaQ00422 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GabpaQ00422 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
GabpaQ00422 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.9■□□□□ 0.3
GabpaQ00422 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GabpaQ00422 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
GabpaQ00422 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
GabpaQ00422 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
GabpaQ00422 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GabpaQ00422 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GabpaQ00422 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GabpaQ00422 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GabpaQ00422 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GabpaQ00422 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GabpaQ00422 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GabpaQ00422 Gm25144-201ENSMUST00000179561 110 ntBASIC16.89■□□□□ 0.29
GabpaQ00422 Gm25352-201ENSMUST00000179815 110 ntBASIC16.89■□□□□ 0.29
GabpaQ00422 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GabpaQ00422 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GabpaQ00422 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
GabpaQ00422 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GabpaQ00422 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GabpaQ00422 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
GabpaQ00422 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
GabpaQ00422 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
GabpaQ00422 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GabpaQ00422 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GabpaQ00422 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GabpaQ00422 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GabpaQ00422 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GabpaQ00422 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GabpaQ00422 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
GabpaQ00422 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
GabpaQ00422 Gm13453-201ENSMUST00000118708 357 ntBASIC16.88■□□□□ 0.29
GabpaQ00422 Gm12151-201ENSMUST00000121374 290 ntBASIC16.88■□□□□ 0.29
GabpaQ00422 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GabpaQ00422 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GabpaQ00422 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GabpaQ00422 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
GabpaQ00422 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.88■□□□□ 0.29
GabpaQ00422 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
GabpaQ00422 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GabpaQ00422 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
GabpaQ00422 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GabpaQ00422 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GabpaQ00422 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GabpaQ00422 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.87■□□□□ 0.29
GabpaQ00422 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
GabpaQ00422 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GabpaQ00422 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GabpaQ00422 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GabpaQ00422 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GabpaQ00422 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
GabpaQ00422 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GabpaQ00422 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GabpaQ00422 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.87■□□□□ 0.29
GabpaQ00422 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GabpaQ00422 Gm6888-201ENSMUST00000221983 706 ntBASIC16.87■□□□□ 0.29
GabpaQ00422 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
GabpaQ00422 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GabpaQ00422 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
GabpaQ00422 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.87■□□□□ 0.29
GabpaQ00422 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
GabpaQ00422 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
GabpaQ00422 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.87■□□□□ 0.29
GabpaQ00422 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GabpaQ00422 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GabpaQ00422 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GabpaQ00422 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GabpaQ00422 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GabpaQ00422 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GabpaQ00422 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GabpaQ00422 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.86■□□□□ 0.29
GabpaQ00422 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GabpaQ00422 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
GabpaQ00422 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.86■□□□□ 0.29
GabpaQ00422 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GabpaQ00422 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
GabpaQ00422 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
GabpaQ00422 Gm13823-201ENSMUST00000119930 345 ntBASIC16.86■□□□□ 0.29
GabpaQ00422 Gm17837-201ENSMUST00000186435 985 ntBASIC16.86■□□□□ 0.29
GabpaQ00422 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
GabpaQ00422 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GabpaQ00422 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
GabpaQ00422 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GabpaQ00422 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GabpaQ00422 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GabpaQ00422 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GabpaQ00422 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GabpaQ00422 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GabpaQ00422 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GabpaQ00422 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GabpaQ00422 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.85■□□□□ 0.29
GabpaQ00422 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
GabpaQ00422 Gm8410-201ENSMUST00000117225 605 ntBASIC16.85■□□□□ 0.29
GabpaQ00422 Gm13464-201ENSMUST00000119418 935 ntBASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms