Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.75□□□□□ -0.21
Cacna1aP97445 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1aP97445 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1aP97445 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.75□□□□□ -0.21
Cacna1aP97445 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Cacna1aP97445 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cacna1aP97445 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1aP97445 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.74□□□□□ -0.21
Cacna1aP97445 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.74□□□□□ -0.21
Cacna1aP97445 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Cacna1aP97445 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1aP97445 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1aP97445 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1aP97445 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.74□□□□□ -0.21
Cacna1aP97445 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cacna1aP97445 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1aP97445 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1aP97445 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1aP97445 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1aP97445 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1aP97445 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1aP97445 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cacna1aP97445 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1aP97445 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1aP97445 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Cacna1aP97445 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.74□□□□□ -0.21
Cacna1aP97445 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1aP97445 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cacna1aP97445 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1aP97445 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1aP97445 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Cacna1aP97445 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1aP97445 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1aP97445 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cacna1aP97445 Gm4875-201ENSMUST00000118257 786 ntBASIC13.74□□□□□ -0.21
Cacna1aP97445 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.74□□□□□ -0.21
Cacna1aP97445 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.74□□□□□ -0.21
Cacna1aP97445 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1aP97445 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1aP97445 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1aP97445 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cacna1aP97445 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1aP97445 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cacna1aP97445 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1aP97445 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1aP97445 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1aP97445 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
Cacna1aP97445 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1aP97445 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1aP97445 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1aP97445 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1aP97445 Gm42612-201ENSMUST00000197986 623 ntBASIC13.73□□□□□ -0.21
Cacna1aP97445 Gm43170-201ENSMUST00000199827 612 ntBASIC13.73□□□□□ -0.21
Cacna1aP97445 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1aP97445 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.73□□□□□ -0.21
Cacna1aP97445 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1aP97445 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1aP97445 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1aP97445 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1aP97445 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.73□□□□□ -0.21
Cacna1aP97445 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Cacna1aP97445 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1aP97445 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Cacna1aP97445 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1aP97445 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1aP97445 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Cacna1aP97445 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.73□□□□□ -0.21
Cacna1aP97445 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1aP97445 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1aP97445 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1aP97445 Gm13216-201ENSMUST00000117145 591 ntBASIC13.73□□□□□ -0.21
Cacna1aP97445 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.73□□□□□ -0.21
Cacna1aP97445 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.73□□□□□ -0.21
Cacna1aP97445 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1aP97445 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1aP97445 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Cacna1aP97445 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1aP97445 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cacna1aP97445 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1aP97445 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1aP97445 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Cacna1aP97445 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1aP97445 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.72□□□□□ -0.21
Cacna1aP97445 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.72□□□□□ -0.21
Cacna1aP97445 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cacna1aP97445 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cacna1aP97445 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1aP97445 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1aP97445 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1aP97445 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1aP97445 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Cacna1aP97445 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1aP97445 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1aP97445 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1aP97445 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1aP97445 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Cacna1aP97445 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cacna1aP97445 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Cacna1aP97445 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cacna1aP97445 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms