Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim43cP86449 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim43cP86449 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim43cP86449 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.2■□□□□ 0.18
Trim43cP86449 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.2■□□□□ 0.18
Trim43cP86449 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim43cP86449 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim43cP86449 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim43cP86449 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim43cP86449 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim43cP86449 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim43cP86449 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.2■□□□□ 0.18
Trim43cP86449 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim43cP86449 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim43cP86449 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim43cP86449 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Trim43cP86449 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim43cP86449 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43cP86449 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43cP86449 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43cP86449 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43cP86449 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43cP86449 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.19■□□□□ 0.18
Trim43cP86449 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43cP86449 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43cP86449 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43cP86449 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.19■□□□□ 0.18
Trim43cP86449 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.19■□□□□ 0.18
Trim43cP86449 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43cP86449 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trim43cP86449 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trim43cP86449 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43cP86449 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trim43cP86449 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43cP86449 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trim43cP86449 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43cP86449 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trim43cP86449 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trim43cP86449 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.19■□□□□ 0.18
Trim43cP86449 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trim43cP86449 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43cP86449 Gm44492-201ENSMUST00000197012 141 ntBASIC16.19■□□□□ 0.18
Trim43cP86449 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43cP86449 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43cP86449 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43cP86449 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43cP86449 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43cP86449 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43cP86449 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43cP86449 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43cP86449 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Trim43cP86449 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43cP86449 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Trim43cP86449 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trim43cP86449 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43cP86449 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43cP86449 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim43cP86449 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim43cP86449 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim43cP86449 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Trim43cP86449 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim43cP86449 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.18■□□□□ 0.18
Trim43cP86449 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim43cP86449 Gm4995-201ENSMUST00000117247 432 ntBASIC16.18■□□□□ 0.18
Trim43cP86449 Gm14494-201ENSMUST00000118786 435 ntBASIC16.18■□□□□ 0.18
Trim43cP86449 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim43cP86449 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim43cP86449 Rpph1-201ENSMUST00000175096 319 ntBASIC16.18■□□□□ 0.18
Trim43cP86449 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.18■□□□□ 0.18
Trim43cP86449 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim43cP86449 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim43cP86449 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Trim43cP86449 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim43cP86449 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Trim43cP86449 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.18■□□□□ 0.18
Trim43cP86449 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim43cP86449 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim43cP86449 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trim43cP86449 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43cP86449 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43cP86449 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43cP86449 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43cP86449 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43cP86449 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43cP86449 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43cP86449 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43cP86449 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43cP86449 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43cP86449 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.17■□□□□ 0.18
Trim43cP86449 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43cP86449 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43cP86449 Mir8117-201ENSMUST00000184773 107 ntBASIC16.17■□□□□ 0.18
Trim43cP86449 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.17■□□□□ 0.18
Trim43cP86449 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trim43cP86449 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.17■□□□□ 0.18
Trim43cP86449 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43cP86449 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.17■□□□□ 0.18
Trim43cP86449 Gm10154-201ENSMUST00000084445 354 ntBASIC16.17■□□□□ 0.18
Trim43cP86449 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Trim43cP86449 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms