Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sec61a1P61620 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sec61a1P61620 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sec61a1P61620 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sec61a1P61620 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.16□□□□□ -0.3
Sec61a1P61620 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sec61a1P61620 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sec61a1P61620 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sec61a1P61620 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sec61a1P61620 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sec61a1P61620 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sec61a1P61620 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Sec61a1P61620 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.15□□□□□ -0.3
Sec61a1P61620 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.15□□□□□ -0.3
Sec61a1P61620 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Sec61a1P61620 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Sec61a1P61620 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Sec61a1P61620 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Sec61a1P61620 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.15□□□□□ -0.3
Sec61a1P61620 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sec61a1P61620 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Sec61a1P61620 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a1P61620 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a1P61620 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Sec61a1P61620 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Sec61a1P61620 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a1P61620 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a1P61620 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.14□□□□□ -0.31
Sec61a1P61620 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a1P61620 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a1P61620 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a1P61620 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Sec61a1P61620 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Sec61a1P61620 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Sec61a1P61620 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a1P61620 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a1P61620 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a1P61620 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a1P61620 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a1P61620 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Sec61a1P61620 Gm7862-201ENSMUST00000121461 292 ntBASIC13.14□□□□□ -0.31
Sec61a1P61620 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Sec61a1P61620 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a1P61620 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a1P61620 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.14□□□□□ -0.31
Sec61a1P61620 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Sec61a1P61620 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a1P61620 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Sec61a1P61620 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Sec61a1P61620 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a1P61620 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a1P61620 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a1P61620 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a1P61620 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Sec61a1P61620 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a1P61620 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a1P61620 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a1P61620 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Sec61a1P61620 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a1P61620 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Sec61a1P61620 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a1P61620 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Sec61a1P61620 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sec61a1P61620 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a1P61620 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sec61a1P61620 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms