Protein–RNA interactions for Protein: P61358

Rpl27, 60S ribosomal protein L27, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl27P61358 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl27P61358 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl27P61358 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Rpl27P61358 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl27P61358 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl27P61358 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl27P61358 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl27P61358 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rpl27P61358 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl27P61358 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.32□□□□□ -0.28
Rpl27P61358 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl27P61358 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl27P61358 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl27P61358 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Rpl27P61358 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl27P61358 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl27P61358 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl27P61358 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl27P61358 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl27P61358 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Rpl27P61358 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl27P61358 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl27P61358 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.31□□□□□ -0.28
Rpl27P61358 Gm18195-201ENSMUST00000207604 706 ntBASIC13.31□□□□□ -0.28
Rpl27P61358 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl27P61358 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
Rpl27P61358 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl27P61358 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl27P61358 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl27P61358 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl27P61358 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl27P61358 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Rpl27P61358 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Rpl27P61358 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl27P61358 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl27P61358 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl27P61358 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl27P61358 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Rpl27P61358 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
Rpl27P61358 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl27P61358 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl27P61358 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.3□□□□□ -0.28
Rpl27P61358 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl27P61358 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl27P61358 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Rpl27P61358 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl27P61358 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Rpl27P61358 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.3□□□□□ -0.28
Rpl27P61358 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl27P61358 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl27P61358 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl27P61358 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.3□□□□□ -0.28
Rpl27P61358 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl27P61358 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl27P61358 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl27P61358 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.3□□□□□ -0.28
Rpl27P61358 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.3□□□□□ -0.28
Rpl27P61358 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Rpl27P61358 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.3□□□□□ -0.28
Rpl27P61358 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl27P61358 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.3□□□□□ -0.28
Rpl27P61358 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.3□□□□□ -0.28
Rpl27P61358 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl27P61358 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.3□□□□□ -0.28
Rpl27P61358 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl27P61358 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl27P61358 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Rpl27P61358 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.3□□□□□ -0.28
Rpl27P61358 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl27P61358 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.3□□□□□ -0.28
Rpl27P61358 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl27P61358 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl27P61358 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl27P61358 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl27P61358 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.3□□□□□ -0.28
Rpl27P61358 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl27P61358 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl27P61358 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl27P61358 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rpl27P61358 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl27P61358 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl27P61358 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl27P61358 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl27P61358 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl27P61358 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl27P61358 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.29□□□□□ -0.28
Rpl27P61358 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl27P61358 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl27P61358 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl27P61358 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.29□□□□□ -0.28
Rpl27P61358 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.29□□□□□ -0.28
Rpl27P61358 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl27P61358 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.29□□□□□ -0.28
Rpl27P61358 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.29□□□□□ -0.28
Rpl27P61358 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl27P61358 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl27P61358 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Rpl27P61358 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl27P61358 Gm15590-201ENSMUST00000078419 552 ntBASIC13.29□□□□□ -0.28
Rpl27P61358 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms