Protein–RNA interactions for Protein: P56942

Pmch, Pro-MCH, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PmchP56942 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PmchP56942 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PmchP56942 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
PmchP56942 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PmchP56942 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
PmchP56942 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PmchP56942 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PmchP56942 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PmchP56942 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
PmchP56942 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PmchP56942 Gm10013-201ENSMUST00000106074 672 ntBASIC12.21□□□□□ -0.45
PmchP56942 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PmchP56942 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PmchP56942 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PmchP56942 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.21□□□□□ -0.45
PmchP56942 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.21□□□□□ -0.45
PmchP56942 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PmchP56942 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.21□□□□□ -0.45
PmchP56942 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PmchP56942 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PmchP56942 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.21□□□□□ -0.45
PmchP56942 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PmchP56942 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
PmchP56942 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PmchP56942 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PmchP56942 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
PmchP56942 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
PmchP56942 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.21□□□□□ -0.45
PmchP56942 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PmchP56942 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PmchP56942 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
PmchP56942 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.21□□□□□ -0.46
PmchP56942 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
PmchP56942 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.21□□□□□ -0.46
PmchP56942 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PmchP56942 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PmchP56942 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PmchP56942 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
PmchP56942 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PmchP56942 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
PmchP56942 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PmchP56942 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
PmchP56942 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
PmchP56942 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
PmchP56942 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PmchP56942 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PmchP56942 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
PmchP56942 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PmchP56942 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PmchP56942 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
PmchP56942 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.2□□□□□ -0.46
PmchP56942 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.2□□□□□ -0.46
PmchP56942 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
PmchP56942 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PmchP56942 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
PmchP56942 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PmchP56942 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PmchP56942 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
PmchP56942 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
PmchP56942 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
PmchP56942 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PmchP56942 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.2□□□□□ -0.46
PmchP56942 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
PmchP56942 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PmchP56942 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
PmchP56942 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.2□□□□□ -0.46
PmchP56942 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
PmchP56942 Gm25406-201ENSMUST00000157599 105 ntBASIC12.2□□□□□ -0.46
PmchP56942 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
PmchP56942 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.2□□□□□ -0.46
PmchP56942 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PmchP56942 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PmchP56942 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PmchP56942 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PmchP56942 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PmchP56942 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
PmchP56942 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PmchP56942 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
PmchP56942 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PmchP56942 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
PmchP56942 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PmchP56942 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PmchP56942 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
PmchP56942 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PmchP56942 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PmchP56942 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PmchP56942 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.2□□□□□ -0.46
PmchP56942 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
PmchP56942 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
PmchP56942 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
PmchP56942 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PmchP56942 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
PmchP56942 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PmchP56942 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
PmchP56942 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
PmchP56942 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PmchP56942 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
PmchP56942 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PmchP56942 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PmchP56942 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms