Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rrp1P56183 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rrp1P56183 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Rrp1P56183 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Rrp1P56183 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rrp1P56183 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rrp1P56183 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rrp1P56183 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Rrp1P56183 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rrp1P56183 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Rrp1P56183 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rrp1P56183 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Rrp1P56183 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rrp1P56183 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rrp1P56183 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.83■□□□□ 0.28
Rrp1P56183 Gm27741-201ENSMUST00000185060 237 ntBASIC16.83■□□□□ 0.28
Rrp1P56183 Gm17971-201ENSMUST00000190239 806 ntBASIC16.83■□□□□ 0.28
Rrp1P56183 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.83■□□□□ 0.28
Rrp1P56183 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.83■□□□□ 0.28
Rrp1P56183 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.83■□□□□ 0.28
Rrp1P56183 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rrp1P56183 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.83■□□□□ 0.28
Rrp1P56183 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rrp1P56183 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rrp1P56183 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rrp1P56183 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rrp1P56183 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.83■□□□□ 0.28
Rrp1P56183 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rrp1P56183 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rrp1P56183 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rrp1P56183 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Rrp1P56183 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.83■□□□□ 0.28
Rrp1P56183 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.82■□□□□ 0.28
Rrp1P56183 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rrp1P56183 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rrp1P56183 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rrp1P56183 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rrp1P56183 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.82■□□□□ 0.28
Rrp1P56183 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.82■□□□□ 0.28
Rrp1P56183 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rrp1P56183 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rrp1P56183 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rrp1P56183 Gm18489-201ENSMUST00000172565 551 ntBASIC16.82■□□□□ 0.28
Rrp1P56183 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.82■□□□□ 0.28
Rrp1P56183 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rrp1P56183 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rrp1P56183 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rrp1P56183 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.82■□□□□ 0.28
Rrp1P56183 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rrp1P56183 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.82■□□□□ 0.28
Rrp1P56183 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Rrp1P56183 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
Rrp1P56183 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rrp1P56183 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rrp1P56183 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rrp1P56183 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Rrp1P56183 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rrp1P56183 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rrp1P56183 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rrp1P56183 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.81■□□□□ 0.28
Rrp1P56183 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.81■□□□□ 0.28
Rrp1P56183 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rrp1P56183 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.81■□□□□ 0.28
Rrp1P56183 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.81■□□□□ 0.28
Rrp1P56183 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.81■□□□□ 0.28
Rrp1P56183 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.81■□□□□ 0.28
Rrp1P56183 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.81■□□□□ 0.28
Rrp1P56183 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rrp1P56183 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.81■□□□□ 0.28
Rrp1P56183 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rrp1P56183 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rrp1P56183 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rrp1P56183 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rrp1P56183 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rrp1P56183 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rrp1P56183 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.8■□□□□ 0.28
Rrp1P56183 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rrp1P56183 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rrp1P56183 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.8■□□□□ 0.28
Rrp1P56183 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rrp1P56183 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rrp1P56183 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rrp1P56183 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rrp1P56183 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Rrp1P56183 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.8■□□□□ 0.28
Rrp1P56183 Gm4535-201ENSMUST00000182274 558 ntBASIC16.8■□□□□ 0.28
Rrp1P56183 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.8■□□□□ 0.28
Rrp1P56183 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.8■□□□□ 0.28
Rrp1P56183 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rrp1P56183 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rrp1P56183 Gm10355-201ENSMUST00000097146 517 ntBASIC16.8■□□□□ 0.28
Rrp1P56183 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rrp1P56183 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rrp1P56183 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rrp1P56183 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rrp1P56183 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rrp1P56183 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rrp1P56183 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rrp1P56183 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rrp1P56183 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms