Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdkn2bP55271 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdkn2bP55271 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Cdkn2bP55271 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.3□□□□□ -0.12
Cdkn2bP55271 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Cdkn2bP55271 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.3□□□□□ -0.12
Cdkn2bP55271 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdkn2bP55271 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdkn2bP55271 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdkn2bP55271 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdkn2bP55271 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdkn2bP55271 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdkn2bP55271 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdkn2bP55271 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cdkn2bP55271 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.3□□□□□ -0.12
Cdkn2bP55271 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.3□□□□□ -0.12
Cdkn2bP55271 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdkn2bP55271 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.3□□□□□ -0.12
Cdkn2bP55271 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdkn2bP55271 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdkn2bP55271 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdkn2bP55271 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdkn2bP55271 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cdkn2bP55271 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdkn2bP55271 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Cdkn2bP55271 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdkn2bP55271 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdkn2bP55271 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdkn2bP55271 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdkn2bP55271 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdkn2bP55271 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdkn2bP55271 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdkn2bP55271 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdkn2bP55271 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdkn2bP55271 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdkn2bP55271 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdkn2bP55271 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.29□□□□□ -0.12
Cdkn2bP55271 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdkn2bP55271 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cdkn2bP55271 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cdkn2bP55271 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cdkn2bP55271 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.29□□□□□ -0.12
Cdkn2bP55271 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdkn2bP55271 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdkn2bP55271 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cdkn2bP55271 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdkn2bP55271 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdkn2bP55271 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdkn2bP55271 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdkn2bP55271 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdkn2bP55271 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdkn2bP55271 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdkn2bP55271 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdkn2bP55271 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdkn2bP55271 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdkn2bP55271 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdkn2bP55271 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdkn2bP55271 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdkn2bP55271 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdkn2bP55271 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.28□□□□□ -0.12
Cdkn2bP55271 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cdkn2bP55271 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdkn2bP55271 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdkn2bP55271 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.28□□□□□ -0.12
Cdkn2bP55271 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdkn2bP55271 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cdkn2bP55271 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cdkn2bP55271 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdkn2bP55271 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdkn2bP55271 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdkn2bP55271 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
Cdkn2bP55271 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.28□□□□□ -0.12
Cdkn2bP55271 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdkn2bP55271 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Cdkn2bP55271 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdkn2bP55271 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdkn2bP55271 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.28□□□□□ -0.12
Cdkn2bP55271 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Cdkn2bP55271 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdkn2bP55271 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdkn2bP55271 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdkn2bP55271 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cdkn2bP55271 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdkn2bP55271 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdkn2bP55271 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdkn2bP55271 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdkn2bP55271 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cdkn2bP55271 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cdkn2bP55271 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdkn2bP55271 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdkn2bP55271 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Cdkn2bP55271 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdkn2bP55271 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdkn2bP55271 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdkn2bP55271 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdkn2bP55271 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cdkn2bP55271 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.27□□□□□ -0.12
Cdkn2bP55271 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdkn2bP55271 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Cdkn2bP55271 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms