Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abcd3P55096 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abcd3P55096 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abcd3P55096 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Abcd3P55096 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abcd3P55096 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abcd3P55096 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Abcd3P55096 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.34□□□□□ -0.27
Abcd3P55096 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Abcd3P55096 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abcd3P55096 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Abcd3P55096 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abcd3P55096 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Abcd3P55096 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Abcd3P55096 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abcd3P55096 Gm27628-201ENSMUST00000184911 107 ntBASIC13.34□□□□□ -0.27
Abcd3P55096 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.34□□□□□ -0.27
Abcd3P55096 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.34□□□□□ -0.27
Abcd3P55096 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abcd3P55096 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Abcd3P55096 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Abcd3P55096 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Abcd3P55096 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Abcd3P55096 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Abcd3P55096 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Abcd3P55096 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Abcd3P55096 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abcd3P55096 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abcd3P55096 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abcd3P55096 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Abcd3P55096 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Abcd3P55096 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Abcd3P55096 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Abcd3P55096 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abcd3P55096 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abcd3P55096 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Abcd3P55096 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Abcd3P55096 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abcd3P55096 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abcd3P55096 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Abcd3P55096 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.33□□□□□ -0.27
Abcd3P55096 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.27
Abcd3P55096 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.27
Abcd3P55096 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abcd3P55096 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abcd3P55096 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abcd3P55096 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abcd3P55096 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Abcd3P55096 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Abcd3P55096 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abcd3P55096 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abcd3P55096 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abcd3P55096 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abcd3P55096 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abcd3P55096 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.33□□□□□ -0.28
Abcd3P55096 Gm12350-201ENSMUST00000121208 462 ntBASIC13.33□□□□□ -0.28
Abcd3P55096 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.33□□□□□ -0.28
Abcd3P55096 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.33□□□□□ -0.28
Abcd3P55096 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Abcd3P55096 Gm27300-201ENSMUST00000184085 97 ntBASIC13.33□□□□□ -0.28
Abcd3P55096 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.33□□□□□ -0.28
Abcd3P55096 Gm27335-201ENSMUST00000184758 97 ntBASIC13.33□□□□□ -0.28
Abcd3P55096 Gm43514-201ENSMUST00000198852 424 ntBASIC13.33□□□□□ -0.28
Abcd3P55096 Gm6443-201ENSMUST00000203599 874 ntBASIC13.33□□□□□ -0.28
Abcd3P55096 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.33□□□□□ -0.28
Abcd3P55096 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.33□□□□□ -0.28
Abcd3P55096 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.33□□□□□ -0.28
Abcd3P55096 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abcd3P55096 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Abcd3P55096 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abcd3P55096 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Abcd3P55096 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abcd3P55096 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Abcd3P55096 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Abcd3P55096 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abcd3P55096 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.33□□□□□ -0.28
Abcd3P55096 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Abcd3P55096 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abcd3P55096 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abcd3P55096 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abcd3P55096 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abcd3P55096 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abcd3P55096 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Abcd3P55096 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Abcd3P55096 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abcd3P55096 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abcd3P55096 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.32□□□□□ -0.28
Abcd3P55096 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abcd3P55096 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abcd3P55096 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abcd3P55096 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abcd3P55096 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Abcd3P55096 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abcd3P55096 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.32□□□□□ -0.28
Abcd3P55096 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Abcd3P55096 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.32□□□□□ -0.28
Abcd3P55096 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.32□□□□□ -0.28
Abcd3P55096 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Abcd3P55096 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Abcd3P55096 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms