Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Atxn1P54254 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
Atxn1P54254 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Atxn1P54254 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.82□□□□□ -0.04
Atxn1P54254 Gm8410-201ENSMUST00000117225 605 ntBASIC14.82□□□□□ -0.04
Atxn1P54254 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.82□□□□□ -0.04
Atxn1P54254 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Atxn1P54254 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Atxn1P54254 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Atxn1P54254 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.82□□□□□ -0.04
Atxn1P54254 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.82□□□□□ -0.04
Atxn1P54254 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Atxn1P54254 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.82□□□□□ -0.04
Atxn1P54254 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Atxn1P54254 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Atxn1P54254 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Atxn1P54254 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.82□□□□□ -0.04
Atxn1P54254 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Atxn1P54254 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Atxn1P54254 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Atxn1P54254 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.82□□□□□ -0.04
Atxn1P54254 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Atxn1P54254 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Atxn1P54254 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Atxn1P54254 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atxn1P54254 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atxn1P54254 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atxn1P54254 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atxn1P54254 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Atxn1P54254 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atxn1P54254 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Atxn1P54254 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Atxn1P54254 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.81□□□□□ -0.04
Atxn1P54254 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.81□□□□□ -0.04
Atxn1P54254 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atxn1P54254 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atxn1P54254 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Atxn1P54254 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Atxn1P54254 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.81□□□□□ -0.04
Atxn1P54254 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Atxn1P54254 Grk6-207ENSMUST00000225925 2769 ntBASIC14.81□□□□□ -0.04
Atxn1P54254 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Atxn1P54254 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Atxn1P54254 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Atxn1P54254 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atxn1P54254 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atxn1P54254 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atxn1P54254 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.8□□□□□ -0.04
Atxn1P54254 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atxn1P54254 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Atxn1P54254 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Atxn1P54254 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Atxn1P54254 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atxn1P54254 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Atxn1P54254 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Atxn1P54254 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atxn1P54254 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atxn1P54254 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atxn1P54254 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.8□□□□□ -0.04
Atxn1P54254 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atxn1P54254 Gm14719-201ENSMUST00000121891 340 ntBASIC14.8□□□□□ -0.04
Atxn1P54254 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.8□□□□□ -0.04
Atxn1P54254 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.8□□□□□ -0.04
Atxn1P54254 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atxn1P54254 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Atxn1P54254 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atxn1P54254 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.8□□□□□ -0.04
Atxn1P54254 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Atxn1P54254 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atxn1P54254 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Atxn1P54254 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Atxn1P54254 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Atxn1P54254 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atxn1P54254 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.79□□□□□ -0.04
Atxn1P54254 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atxn1P54254 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atxn1P54254 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atxn1P54254 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Atxn1P54254 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Atxn1P54254 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Atxn1P54254 Gm15487-201ENSMUST00000122373 465 ntBASIC14.79□□□□□ -0.04
Atxn1P54254 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atxn1P54254 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atxn1P54254 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atxn1P54254 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.79□□□□□ -0.04
Atxn1P54254 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Atxn1P54254 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Atxn1P54254 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.79□□□□□ -0.04
Atxn1P54254 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.79□□□□□ -0.04
Atxn1P54254 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atxn1P54254 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.79□□□□□ -0.04
Atxn1P54254 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atxn1P54254 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Atxn1P54254 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atxn1P54254 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atxn1P54254 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atxn1P54254 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Atxn1P54254 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Atxn1P54254 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atxn1P54254 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms