Protein–RNA interactions for Protein: P52483

Ube2e3, Ubiquitin-conjugating enzyme E2 E3, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2e3P52483 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube2e3P52483 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube2e3P52483 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube2e3P52483 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube2e3P52483 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube2e3P52483 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ube2e3P52483 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ube2e3P52483 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.31□□□□□ -0.12
Ube2e3P52483 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.31□□□□□ -0.12
Ube2e3P52483 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.31□□□□□ -0.12
Ube2e3P52483 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.31□□□□□ -0.12
Ube2e3P52483 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.31□□□□□ -0.12
Ube2e3P52483 Gm2272-201ENSMUST00000194903 582 ntBASIC14.31□□□□□ -0.12
Ube2e3P52483 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ube2e3P52483 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ube2e3P52483 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube2e3P52483 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube2e3P52483 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Ube2e3P52483 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube2e3P52483 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube2e3P52483 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube2e3P52483 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ube2e3P52483 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube2e3P52483 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube2e3P52483 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube2e3P52483 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ube2e3P52483 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube2e3P52483 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube2e3P52483 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube2e3P52483 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube2e3P52483 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube2e3P52483 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Ube2e3P52483 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.3□□□□□ -0.12
Ube2e3P52483 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.3□□□□□ -0.12
Ube2e3P52483 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.3□□□□□ -0.12
Ube2e3P52483 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.3□□□□□ -0.12
Ube2e3P52483 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.3□□□□□ -0.12
Ube2e3P52483 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.3□□□□□ -0.12
Ube2e3P52483 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.3□□□□□ -0.12
Ube2e3P52483 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube2e3P52483 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ube2e3P52483 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube2e3P52483 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube2e3P52483 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube2e3P52483 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.3□□□□□ -0.12
Ube2e3P52483 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ube2e3P52483 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.3□□□□□ -0.12
Ube2e3P52483 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Ube2e3P52483 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube2e3P52483 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ube2e3P52483 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube2e3P52483 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube2e3P52483 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube2e3P52483 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube2e3P52483 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Ube2e3P52483 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube2e3P52483 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
Ube2e3P52483 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube2e3P52483 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube2e3P52483 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube2e3P52483 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube2e3P52483 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ube2e3P52483 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.29□□□□□ -0.12
Ube2e3P52483 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.29□□□□□ -0.12
Ube2e3P52483 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.29□□□□□ -0.12
Ube2e3P52483 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.29□□□□□ -0.12
Ube2e3P52483 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.29□□□□□ -0.12
Ube2e3P52483 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
Ube2e3P52483 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube2e3P52483 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube2e3P52483 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube2e3P52483 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.29□□□□□ -0.12
Ube2e3P52483 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube2e3P52483 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.29□□□□□ -0.12
Ube2e3P52483 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
Ube2e3P52483 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ube2e3P52483 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ube2e3P52483 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ube2e3P52483 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube2e3P52483 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube2e3P52483 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube2e3P52483 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube2e3P52483 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube2e3P52483 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube2e3P52483 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Ube2e3P52483 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube2e3P52483 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube2e3P52483 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube2e3P52483 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
Ube2e3P52483 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube2e3P52483 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ube2e3P52483 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube2e3P52483 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.28□□□□□ -0.12
Ube2e3P52483 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube2e3P52483 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ube2e3P52483 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.28□□□□□ -0.12
Ube2e3P52483 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube2e3P52483 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube2e3P52483 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube2e3P52483 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms