Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GdnfP48540 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GdnfP48540 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GdnfP48540 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GdnfP48540 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GdnfP48540 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
GdnfP48540 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
GdnfP48540 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GdnfP48540 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
GdnfP48540 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GdnfP48540 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GdnfP48540 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
GdnfP48540 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GdnfP48540 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GdnfP48540 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GdnfP48540 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GdnfP48540 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
GdnfP48540 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.09□□□□□ -0.31
GdnfP48540 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
GdnfP48540 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.08□□□□□ -0.31
GdnfP48540 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
GdnfP48540 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
GdnfP48540 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
GdnfP48540 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
GdnfP48540 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
GdnfP48540 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
GdnfP48540 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
GdnfP48540 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
GdnfP48540 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GdnfP48540 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
GdnfP48540 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GdnfP48540 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GdnfP48540 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GdnfP48540 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
GdnfP48540 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
GdnfP48540 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GdnfP48540 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
GdnfP48540 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
GdnfP48540 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.08□□□□□ -0.32
GdnfP48540 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.08□□□□□ -0.32
GdnfP48540 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
GdnfP48540 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.08□□□□□ -0.32
GdnfP48540 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.08□□□□□ -0.32
GdnfP48540 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GdnfP48540 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GdnfP48540 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
GdnfP48540 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GdnfP48540 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
GdnfP48540 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GdnfP48540 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
GdnfP48540 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GdnfP48540 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
GdnfP48540 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GdnfP48540 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
GdnfP48540 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
GdnfP48540 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
GdnfP48540 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
GdnfP48540 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.08□□□□□ -0.32
GdnfP48540 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GdnfP48540 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GdnfP48540 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
GdnfP48540 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
GdnfP48540 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GdnfP48540 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GdnfP48540 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.07□□□□□ -0.32
GdnfP48540 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GdnfP48540 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GdnfP48540 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
GdnfP48540 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GdnfP48540 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
GdnfP48540 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
GdnfP48540 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.07□□□□□ -0.32
GdnfP48540 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
GdnfP48540 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.07□□□□□ -0.32
GdnfP48540 Gm34391-201ENSMUST00000203706 907 ntBASIC13.07□□□□□ -0.32
GdnfP48540 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.07□□□□□ -0.32
GdnfP48540 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
GdnfP48540 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
GdnfP48540 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
GdnfP48540 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GdnfP48540 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GdnfP48540 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
GdnfP48540 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GdnfP48540 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
GdnfP48540 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
GdnfP48540 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
GdnfP48540 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
GdnfP48540 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GdnfP48540 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GdnfP48540 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GdnfP48540 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
GdnfP48540 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GdnfP48540 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GdnfP48540 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GdnfP48540 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
GdnfP48540 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
GdnfP48540 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GdnfP48540 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GdnfP48540 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
GdnfP48540 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms