Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Vps4bP46467 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps4bP46467 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.14■□□□□ 0.01
Vps4bP46467 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps4bP46467 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps4bP46467 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps4bP46467 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Vps4bP46467 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps4bP46467 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps4bP46467 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps4bP46467 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.13■□□□□ 0.01
Vps4bP46467 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps4bP46467 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps4bP46467 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps4bP46467 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps4bP46467 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Vps4bP46467 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Vps4bP46467 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps4bP46467 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.13■□□□□ 0.01
Vps4bP46467 Gm9682-201ENSMUST00000197505 556 ntBASIC15.13■□□□□ 0.01
Vps4bP46467 Gm7787-201ENSMUST00000216858 688 ntBASIC15.13■□□□□ 0.01
Vps4bP46467 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps4bP46467 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps4bP46467 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps4bP46467 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
Vps4bP46467 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Vps4bP46467 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Vps4bP46467 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps4bP46467 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps4bP46467 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps4bP46467 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps4bP46467 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps4bP46467 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps4bP46467 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps4bP46467 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.12■□□□□ 0.01
Vps4bP46467 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps4bP46467 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps4bP46467 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.12■□□□□ 0.01
Vps4bP46467 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.12■□□□□ 0.01
Vps4bP46467 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.12■□□□□ 0.01
Vps4bP46467 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps4bP46467 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps4bP46467 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Vps4bP46467 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps4bP46467 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.12■□□□□ 0.01
Vps4bP46467 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps4bP46467 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps4bP46467 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps4bP46467 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.12■□□□□ 0.01
Vps4bP46467 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.12■□□□□ 0.01
Vps4bP46467 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.12■□□□□ 0.01
Vps4bP46467 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Vps4bP46467 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Vps4bP46467 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.12■□□□□ 0.01
Vps4bP46467 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps4bP46467 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps4bP46467 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps4bP46467 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.12■□□□□ 0.01
Vps4bP46467 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps4bP46467 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps4bP46467 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps4bP46467 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Vps4bP46467 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps4bP46467 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps4bP46467 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps4bP46467 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.11■□□□□ 0.01
Vps4bP46467 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Vps4bP46467 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps4bP46467 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps4bP46467 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps4bP46467 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps4bP46467 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.11■□□□□ 0.01
Vps4bP46467 Gm11764-201ENSMUST00000120221 623 ntBASIC15.11■□□□□ 0.01
Vps4bP46467 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps4bP46467 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps4bP46467 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.11■□□□□ 0.01
Vps4bP46467 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.11■□□□□ 0.01
Vps4bP46467 Gm2213-201ENSMUST00000197485 688 ntBASIC15.11■□□□□ 0.01
Vps4bP46467 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.11■□□□□ 0.01
Vps4bP46467 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps4bP46467 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps4bP46467 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps4bP46467 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps4bP46467 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps4bP46467 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps4bP46467 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps4bP46467 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps4bP46467 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps4bP46467 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Vps4bP46467 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps4bP46467 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps4bP46467 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Vps4bP46467 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Vps4bP46467 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps4bP46467 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps4bP46467 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps4bP46467 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps4bP46467 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps4bP46467 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps4bP46467 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms