Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HttP42859 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.63■□□□□ 0.09
HttP42859 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
HttP42859 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC15.63■□□□□ 0.09
HttP42859 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.63■□□□□ 0.09
HttP42859 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC15.63■□□□□ 0.09
HttP42859 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.63■□□□□ 0.09
HttP42859 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HttP42859 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC15.63■□□□□ 0.09
HttP42859 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HttP42859 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.63■□□□□ 0.09
HttP42859 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HttP42859 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HttP42859 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HttP42859 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.63■□□□□ 0.09
HttP42859 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HttP42859 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
HttP42859 Gm43758-201ENSMUST00000199500 367 ntBASIC15.63■□□□□ 0.09
HttP42859 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HttP42859 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.63■□□□□ 0.09
HttP42859 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HttP42859 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HttP42859 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HttP42859 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HttP42859 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HttP42859 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HttP42859 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.62■□□□□ 0.09
HttP42859 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HttP42859 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HttP42859 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HttP42859 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HttP42859 Gm15376-201ENSMUST00000122258 783 ntBASIC15.62■□□□□ 0.09
HttP42859 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HttP42859 Gm38158-201ENSMUST00000194617 339 ntBASIC15.62■□□□□ 0.09
HttP42859 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HttP42859 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
HttP42859 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HttP42859 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HttP42859 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HttP42859 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.62■□□□□ 0.09
HttP42859 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.62■□□□□ 0.09
HttP42859 Gm7895-201ENSMUST00000187459 1173 ntBASIC15.62■□□□□ 0.09
HttP42859 AC093022.1-201ENSMUST00000226949 1072 ntBASIC15.62■□□□□ 0.09
HttP42859 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HttP42859 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HttP42859 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HttP42859 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
HttP42859 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HttP42859 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HttP42859 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
HttP42859 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC15.61■□□□□ 0.09
HttP42859 Gm27331-201ENSMUST00000183705 60 ntBASIC15.61■□□□□ 0.09
HttP42859 Gm29649-201ENSMUST00000185649 419 ntBASIC15.61■□□□□ 0.09
HttP42859 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HttP42859 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HttP42859 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
HttP42859 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HttP42859 Mir5132-201ENSMUST00000175166 71 ntBASIC15.61■□□□□ 0.09
HttP42859 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
HttP42859 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HttP42859 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HttP42859 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
HttP42859 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HttP42859 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HttP42859 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC15.61■□□□□ 0.09
HttP42859 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HttP42859 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HttP42859 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HttP42859 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.61■□□□□ 0.09
HttP42859 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HttP42859 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.6■□□□□ 0.09
HttP42859 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HttP42859 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HttP42859 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HttP42859 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
HttP42859 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
HttP42859 Gm43289-201ENSMUST00000200537 1475 ntBASIC15.6■□□□□ 0.09
HttP42859 Gm15240-201ENSMUST00000118156 720 ntBASIC15.6■□□□□ 0.09
HttP42859 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HttP42859 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC15.6■□□□□ 0.09
HttP42859 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC15.6■□□□□ 0.09
HttP42859 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HttP42859 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
HttP42859 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HttP42859 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HttP42859 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HttP42859 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HttP42859 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HttP42859 Gm15393-201ENSMUST00000120499 219 ntBASIC15.6■□□□□ 0.09
HttP42859 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HttP42859 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.6■□□□□ 0.09
HttP42859 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HttP42859 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HttP42859 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
HttP42859 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.59■□□□□ 0.09
HttP42859 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HttP42859 Gm38002-201ENSMUST00000193255 180 ntBASIC15.59■□□□□ 0.09
HttP42859 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HttP42859 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
HttP42859 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms