Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.28■□□□□ 0.04
Cxcl12P40224 Gm28911-201ENSMUST00000188837 117 ntBASIC15.28■□□□□ 0.04
Cxcl12P40224 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC15.28■□□□□ 0.04
Cxcl12P40224 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.28■□□□□ 0.04
Cxcl12P40224 AC238811.3-201ENSMUST00000225422 709 ntBASIC15.28■□□□□ 0.04
Cxcl12P40224 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcl12P40224 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcl12P40224 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcl12P40224 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcl12P40224 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcl12P40224 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cxcl12P40224 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cxcl12P40224 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcl12P40224 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcl12P40224 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Cxcl12P40224 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcl12P40224 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cxcl12P40224 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cxcl12P40224 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cxcl12P40224 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cxcl12P40224 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cxcl12P40224 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Cxcl12P40224 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Cxcl12P40224 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cxcl12P40224 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cxcl12P40224 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cxcl12P40224 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cxcl12P40224 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Cxcl12P40224 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cxcl12P40224 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.27■□□□□ 0.04
Cxcl12P40224 Gm12957-201ENSMUST00000117835 377 ntBASIC15.27■□□□□ 0.04
Cxcl12P40224 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cxcl12P40224 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cxcl12P40224 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.27■□□□□ 0.04
Cxcl12P40224 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cxcl12P40224 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cxcl12P40224 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC15.27■□□□□ 0.04
Cxcl12P40224 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC15.27■□□□□ 0.04
Cxcl12P40224 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Cxcl12P40224 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cxcl12P40224 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cxcl12P40224 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Cxcl12P40224 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cxcl12P40224 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cxcl12P40224 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Cxcl12P40224 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cxcl12P40224 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cxcl12P40224 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cxcl12P40224 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cxcl12P40224 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cxcl12P40224 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cxcl12P40224 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cxcl12P40224 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cxcl12P40224 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cxcl12P40224 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.27■□□□□ 0.03
Cxcl12P40224 AC131068.2-201ENSMUST00000226175 1453 ntBASIC15.27■□□□□ 0.03
Cxcl12P40224 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cxcl12P40224 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Cxcl12P40224 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Cxcl12P40224 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cxcl12P40224 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.26■□□□□ 0.03
Cxcl12P40224 Gm45331-201ENSMUST00000209868 554 ntBASIC15.26■□□□□ 0.03
Cxcl12P40224 AC162801.1-201ENSMUST00000220612 198 ntBASIC15.26■□□□□ 0.03
Cxcl12P40224 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.26■□□□□ 0.03
Cxcl12P40224 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cxcl12P40224 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cxcl12P40224 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cxcl12P40224 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cxcl12P40224 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cxcl12P40224 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cxcl12P40224 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cxcl12P40224 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cxcl12P40224 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cxcl12P40224 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cxcl12P40224 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cxcl12P40224 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.25■□□□□ 0.03
Cxcl12P40224 Gm9200-201ENSMUST00000118513 1354 ntBASIC15.25■□□□□ 0.03
Cxcl12P40224 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cxcl12P40224 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cxcl12P40224 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.25■□□□□ 0.03
Cxcl12P40224 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cxcl12P40224 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cxcl12P40224 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.25■□□□□ 0.03
Cxcl12P40224 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cxcl12P40224 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.25■□□□□ 0.03
Cxcl12P40224 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.25■□□□□ 0.03
Cxcl12P40224 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cxcl12P40224 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Cxcl12P40224 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC15.25■□□□□ 0.03
Cxcl12P40224 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC15.25■□□□□ 0.03
Cxcl12P40224 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC15.25■□□□□ 0.03
Cxcl12P40224 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.25■□□□□ 0.03
Cxcl12P40224 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cxcl12P40224 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Cxcl12P40224 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.25■□□□□ 0.03
Cxcl12P40224 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cxcl12P40224 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cxcl12P40224 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cxcl12P40224 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cxcl12P40224 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms