Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.04■□□□□ -0
Fen1P39749 Gm29518-201ENSMUST00000190858 372 ntBASIC15.04■□□□□ -0
Fen1P39749 Gm17808-201ENSMUST00000200859 894 ntBASIC15.04■□□□□ -0
Fen1P39749 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.04■□□□□ -0
Fen1P39749 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.04■□□□□ -0
Fen1P39749 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.04■□□□□ -0
Fen1P39749 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Fen1P39749 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Fen1P39749 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Fen1P39749 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Fen1P39749 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.04■□□□□ -0
Fen1P39749 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Fen1P39749 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.04■□□□□ -0
Fen1P39749 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.04■□□□□ -0
Fen1P39749 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Fen1P39749 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Fen1P39749 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Fen1P39749 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Fen1P39749 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Fen1P39749 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Fen1P39749 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Fen1P39749 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.03■□□□□ -0
Fen1P39749 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Fen1P39749 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Fen1P39749 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Fen1P39749 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.03■□□□□ -0
Fen1P39749 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Fen1P39749 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.03■□□□□ -0
Fen1P39749 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Fen1P39749 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Fen1P39749 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.03■□□□□ -0
Fen1P39749 Gm12134-201ENSMUST00000122109 520 ntBASIC15.03■□□□□ -0
Fen1P39749 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.03■□□□□ -0
Fen1P39749 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.03■□□□□ -0
Fen1P39749 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.03■□□□□ -0
Fen1P39749 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Fen1P39749 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Fen1P39749 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.03■□□□□ -0
Fen1P39749 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Fen1P39749 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Fen1P39749 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Fen1P39749 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.03■□□□□ -0
Fen1P39749 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Fen1P39749 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Fen1P39749 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC15.03■□□□□ -0
Fen1P39749 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.03■□□□□ -0
Fen1P39749 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.03■□□□□ -0
Fen1P39749 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Fen1P39749 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.03■□□□□ -0
Fen1P39749 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Fen1P39749 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.02■□□□□ -0
Fen1P39749 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Fen1P39749 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Fen1P39749 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Fen1P39749 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.02■□□□□ -0
Fen1P39749 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.02■□□□□ -0
Fen1P39749 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.02■□□□□ -0
Fen1P39749 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.02■□□□□ -0
Fen1P39749 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.02■□□□□ -0
Fen1P39749 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Fen1P39749 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.02■□□□□ -0
Fen1P39749 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Fen1P39749 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Fen1P39749 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
Fen1P39749 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Fen1P39749 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Fen1P39749 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.02■□□□□ -0
Fen1P39749 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Fen1P39749 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.02■□□□□ -0
Fen1P39749 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.02■□□□□ -0
Fen1P39749 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.02■□□□□ -0
Fen1P39749 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.02■□□□□ -0
Fen1P39749 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Fen1P39749 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Fen1P39749 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Fen1P39749 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Fen1P39749 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
Fen1P39749 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Fen1P39749 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Fen1P39749 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Fen1P39749 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.02□□□□□ -0.01
Fen1P39749 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Fen1P39749 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Fen1P39749 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Fen1P39749 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.02□□□□□ -0.01
Fen1P39749 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fen1P39749 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fen1P39749 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
Fen1P39749 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fen1P39749 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fen1P39749 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fen1P39749 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fen1P39749 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Fen1P39749 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fen1P39749 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.01□□□□□ -0.01
Fen1P39749 Gm15794-201ENSMUST00000120182 631 ntBASIC15.01□□□□□ -0.01
Fen1P39749 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.01□□□□□ -0.01
Fen1P39749 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Fen1P39749 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.01□□□□□ -0.01
Fen1P39749 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms