Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col18a1P39061 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Col18a1P39061 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col18a1P39061 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col18a1P39061 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col18a1P39061 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col18a1P39061 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col18a1P39061 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col18a1P39061 Gm37812-201ENSMUST00000195216 2475 ntBASIC19.47■□□□□ 0.71
Col18a1P39061 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC19.47■□□□□ 0.71
Col18a1P39061 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC19.47■□□□□ 0.71
Col18a1P39061 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC19.47■□□□□ 0.71
Col18a1P39061 Mir7070-201ENSMUST00000183657 86 ntBASIC19.47■□□□□ 0.71
Col18a1P39061 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC19.47■□□□□ 0.71
Col18a1P39061 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC19.47■□□□□ 0.71
Col18a1P39061 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col18a1P39061 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col18a1P39061 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col18a1P39061 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC19.46■□□□□ 0.71
Col18a1P39061 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col18a1P39061 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Col18a1P39061 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Col18a1P39061 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col18a1P39061 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Col18a1P39061 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC19.46■□□□□ 0.71
Col18a1P39061 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Col18a1P39061 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Col18a1P39061 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col18a1P39061 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC19.46■□□□□ 0.71
Col18a1P39061 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Col18a1P39061 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col18a1P39061 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col18a1P39061 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Col18a1P39061 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col18a1P39061 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC19.46■□□□□ 0.71
Col18a1P39061 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col18a1P39061 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Col18a1P39061 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col18a1P39061 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC19.46■□□□□ 0.71
Col18a1P39061 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col18a1P39061 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col18a1P39061 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col18a1P39061 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col18a1P39061 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC19.45■□□□□ 0.7
Col18a1P39061 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Col18a1P39061 Gm37259-201ENSMUST00000193903 849 ntBASIC19.45■□□□□ 0.7
Col18a1P39061 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC19.45■□□□□ 0.7
Col18a1P39061 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Col18a1P39061 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col18a1P39061 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col18a1P39061 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col18a1P39061 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Col18a1P39061 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.45■□□□□ 0.7
Col18a1P39061 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC19.45■□□□□ 0.7
Col18a1P39061 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col18a1P39061 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col18a1P39061 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Col18a1P39061 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Col18a1P39061 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
Col18a1P39061 Gm15957-201ENSMUST00000118893 974 ntBASIC19.44■□□□□ 0.7
Col18a1P39061 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC19.44■□□□□ 0.7
Col18a1P39061 Gm22331-201ENSMUST00000158066 136 ntBASIC19.44■□□□□ 0.7
Col18a1P39061 Gm27516-201ENSMUST00000184237 98 ntBASIC19.44■□□□□ 0.7
Col18a1P39061 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col18a1P39061 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col18a1P39061 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col18a1P39061 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Col18a1P39061 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col18a1P39061 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC19.44■□□□□ 0.7
Col18a1P39061 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col18a1P39061 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col18a1P39061 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col18a1P39061 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC19.44■□□□□ 0.7
Col18a1P39061 Gm12882-201ENSMUST00000121696 517 ntBASIC19.44■□□□□ 0.7
Col18a1P39061 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col18a1P39061 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col18a1P39061 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC19.44■□□□□ 0.7
Col18a1P39061 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC19.44■□□□□ 0.7
Col18a1P39061 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Col18a1P39061 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col18a1P39061 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col18a1P39061 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col18a1P39061 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC19.43■□□□□ 0.7
Col18a1P39061 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col18a1P39061 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col18a1P39061 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col18a1P39061 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col18a1P39061 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col18a1P39061 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Col18a1P39061 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col18a1P39061 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col18a1P39061 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col18a1P39061 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Col18a1P39061 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col18a1P39061 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Col18a1P39061 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col18a1P39061 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Col18a1P39061 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col18a1P39061 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col18a1P39061 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms