Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.85□□□□□ -0.03
LdlrP35951 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LdlrP35951 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.85□□□□□ -0.03
LdlrP35951 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LdlrP35951 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.85□□□□□ -0.03
LdlrP35951 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LdlrP35951 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LdlrP35951 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.85□□□□□ -0.03
LdlrP35951 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LdlrP35951 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
LdlrP35951 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LdlrP35951 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LdlrP35951 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LdlrP35951 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LdlrP35951 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LdlrP35951 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LdlrP35951 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
LdlrP35951 Gm8318-201ENSMUST00000182954 872 ntBASIC14.85□□□□□ -0.03
LdlrP35951 Gm2756-201ENSMUST00000195851 400 ntBASIC14.85□□□□□ -0.03
LdlrP35951 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LdlrP35951 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.85□□□□□ -0.03
LdlrP35951 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.85□□□□□ -0.03
LdlrP35951 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LdlrP35951 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.85□□□□□ -0.03
LdlrP35951 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.85□□□□□ -0.03
LdlrP35951 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LdlrP35951 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LdlrP35951 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LdlrP35951 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LdlrP35951 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LdlrP35951 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LdlrP35951 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LdlrP35951 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LdlrP35951 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
LdlrP35951 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LdlrP35951 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LdlrP35951 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LdlrP35951 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LdlrP35951 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LdlrP35951 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LdlrP35951 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LdlrP35951 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LdlrP35951 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LdlrP35951 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LdlrP35951 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LdlrP35951 Gm12497-201ENSMUST00000138778 237 ntBASIC14.84□□□□□ -0.03
LdlrP35951 Gm7230-201ENSMUST00000173026 815 ntBASIC14.84□□□□□ -0.03
LdlrP35951 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LdlrP35951 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LdlrP35951 Gm43575-201ENSMUST00000196420 516 ntBASIC14.84□□□□□ -0.03
LdlrP35951 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.84□□□□□ -0.03
LdlrP35951 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.84□□□□□ -0.03
LdlrP35951 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LdlrP35951 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LdlrP35951 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LdlrP35951 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LdlrP35951 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LdlrP35951 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LdlrP35951 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LdlrP35951 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LdlrP35951 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.84□□□□□ -0.03
LdlrP35951 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LdlrP35951 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LdlrP35951 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LdlrP35951 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LdlrP35951 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LdlrP35951 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LdlrP35951 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LdlrP35951 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.84□□□□□ -0.03
LdlrP35951 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.84□□□□□ -0.03
LdlrP35951 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LdlrP35951 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.84□□□□□ -0.03
LdlrP35951 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.03
LdlrP35951 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LdlrP35951 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LdlrP35951 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LdlrP35951 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LdlrP35951 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LdlrP35951 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LdlrP35951 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LdlrP35951 Gm25990-201ENSMUST00000102440 86 ntBASIC14.83□□□□□ -0.04
LdlrP35951 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LdlrP35951 Gm4459-201ENSMUST00000118750 468 ntBASIC14.83□□□□□ -0.04
LdlrP35951 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LdlrP35951 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LdlrP35951 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.83□□□□□ -0.04
LdlrP35951 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LdlrP35951 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LdlrP35951 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LdlrP35951 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LdlrP35951 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LdlrP35951 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LdlrP35951 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LdlrP35951 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LdlrP35951 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
LdlrP35951 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
LdlrP35951 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LdlrP35951 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LdlrP35951 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LdlrP35951 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms