Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Rom1P32958 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rom1P32958 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rom1P32958 Mir770-201ENSMUST00000103252 94 ntBASIC11.81□□□□□ -0.52
Rom1P32958 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.81□□□□□ -0.52
Rom1P32958 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rom1P32958 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rom1P32958 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.81□□□□□ -0.52
Rom1P32958 Gm22697-201ENSMUST00000175194 63 ntBASIC11.81□□□□□ -0.52
Rom1P32958 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Rom1P32958 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rom1P32958 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rom1P32958 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rom1P32958 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Rom1P32958 AC127349.1-201ENSMUST00000224590 266 ntBASIC11.81□□□□□ -0.52
Rom1P32958 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rom1P32958 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rom1P32958 Carlr-201ENSMUST00000181515 2574 ntBASIC11.81□□□□□ -0.52
Rom1P32958 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rom1P32958 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rom1P32958 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rom1P32958 AC157650.3-201ENSMUST00000225058 1476 ntBASIC11.81□□□□□ -0.52
Rom1P32958 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rom1P32958 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rom1P32958 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rom1P32958 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rom1P32958 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC11.81□□□□□ -0.52
Rom1P32958 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rom1P32958 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rom1P32958 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rom1P32958 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC11.81□□□□□ -0.52
Rom1P32958 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rom1P32958 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.81□□□□□ -0.52
Rom1P32958 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rom1P32958 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rom1P32958 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rom1P32958 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rom1P32958 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rom1P32958 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rom1P32958 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC11.8□□□□□ -0.52
Rom1P32958 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rom1P32958 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC11.8□□□□□ -0.52
Rom1P32958 Gm20472-201ENSMUST00000174403 1240 ntBASIC11.8□□□□□ -0.52
Rom1P32958 Gm8318-201ENSMUST00000182954 872 ntBASIC11.8□□□□□ -0.52
Rom1P32958 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC11.8□□□□□ -0.52
Rom1P32958 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rom1P32958 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rom1P32958 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rom1P32958 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Rom1P32958 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rom1P32958 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.8□□□□□ -0.52
Rom1P32958 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Rom1P32958 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rom1P32958 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rom1P32958 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rom1P32958 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rom1P32958 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rom1P32958 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rom1P32958 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Rom1P32958 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rom1P32958 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rom1P32958 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rom1P32958 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rom1P32958 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Rom1P32958 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rom1P32958 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rom1P32958 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rom1P32958 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rom1P32958 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.79□□□□□ -0.52
Rom1P32958 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rom1P32958 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Rom1P32958 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Rom1P32958 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rom1P32958 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rom1P32958 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.79□□□□□ -0.52
Rom1P32958 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Rom1P32958 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.79□□□□□ -0.52
Rom1P32958 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC11.79□□□□□ -0.52
Rom1P32958 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.79□□□□□ -0.52
Rom1P32958 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rom1P32958 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rom1P32958 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.79□□□□□ -0.52
Rom1P32958 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rom1P32958 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rom1P32958 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.79□□□□□ -0.52
Rom1P32958 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rom1P32958 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Rom1P32958 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rom1P32958 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rom1P32958 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rom1P32958 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rom1P32958 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rom1P32958 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rom1P32958 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Rom1P32958 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rom1P32958 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rom1P32958 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Rom1P32958 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.78□□□□□ -0.52
Rom1P32958 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rom1P32958 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms