Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc5P32043 Celf4-206ENSMUST00000224553 1729 ntBASIC13.87□□□□□ -0.19
Hoxc5P32043 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxc5P32043 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Hoxc5P32043 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.87□□□□□ -0.19
Hoxc5P32043 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Hoxc5P32043 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc5P32043 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Hoxc5P32043 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc5P32043 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc5P32043 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.86□□□□□ -0.19
Hoxc5P32043 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc5P32043 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc5P32043 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc5P32043 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc5P32043 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc5P32043 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc5P32043 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc5P32043 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc5P32043 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc5P32043 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Hoxc5P32043 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.86□□□□□ -0.19
Hoxc5P32043 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.86□□□□□ -0.19
Hoxc5P32043 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.86□□□□□ -0.19
Hoxc5P32043 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.86□□□□□ -0.19
Hoxc5P32043 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.86□□□□□ -0.19
Hoxc5P32043 Gm6376-201ENSMUST00000209407 580 ntBASIC13.86□□□□□ -0.19
Hoxc5P32043 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.86□□□□□ -0.19
Hoxc5P32043 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.86□□□□□ -0.19
Hoxc5P32043 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc5P32043 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc5P32043 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc5P32043 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc5P32043 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc5P32043 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc5P32043 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.86□□□□□ -0.19
Hoxc5P32043 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Hoxc5P32043 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc5P32043 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc5P32043 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc5P32043 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc5P32043 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc5P32043 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc5P32043 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc5P32043 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxc5P32043 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc5P32043 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc5P32043 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc5P32043 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc5P32043 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc5P32043 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc5P32043 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc5P32043 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.85□□□□□ -0.19
Hoxc5P32043 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc5P32043 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc5P32043 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.85□□□□□ -0.19
Hoxc5P32043 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.85□□□□□ -0.19
Hoxc5P32043 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc5P32043 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc5P32043 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc5P32043 Gm5682-201ENSMUST00000173402 505 ntBASIC13.85□□□□□ -0.19
Hoxc5P32043 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.85□□□□□ -0.19
Hoxc5P32043 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.85□□□□□ -0.19
Hoxc5P32043 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc5P32043 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc5P32043 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc5P32043 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc5P32043 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.85□□□□□ -0.19
Hoxc5P32043 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc5P32043 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc5P32043 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc5P32043 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc5P32043 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Hoxc5P32043 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Hoxc5P32043 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc5P32043 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc5P32043 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.84□□□□□ -0.19
Hoxc5P32043 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc5P32043 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc5P32043 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc5P32043 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc5P32043 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc5P32043 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.84□□□□□ -0.19
Hoxc5P32043 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc5P32043 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Hoxc5P32043 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc5P32043 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc5P32043 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc5P32043 Gm15173-201ENSMUST00000122049 433 ntBASIC13.84□□□□□ -0.19
Hoxc5P32043 Gm11452-201ENSMUST00000122376 690 ntBASIC13.84□□□□□ -0.19
Hoxc5P32043 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.84□□□□□ -0.19
Hoxc5P32043 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Hoxc5P32043 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.84□□□□□ -0.19
Hoxc5P32043 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc5P32043 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc5P32043 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc5P32043 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc5P32043 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc5P32043 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc5P32043 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms