Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nckap1P28660 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nckap1P28660 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Nckap1P28660 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nckap1P28660 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nckap1P28660 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Nckap1P28660 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nckap1P28660 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nckap1P28660 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nckap1P28660 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nckap1P28660 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.84□□□□□ -0.03
Nckap1P28660 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nckap1P28660 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Nckap1P28660 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nckap1P28660 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nckap1P28660 Gm2810-201ENSMUST00000118681 990 ntBASIC14.84□□□□□ -0.03
Nckap1P28660 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nckap1P28660 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nckap1P28660 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nckap1P28660 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.84□□□□□ -0.03
Nckap1P28660 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nckap1P28660 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.84□□□□□ -0.03
Nckap1P28660 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nckap1P28660 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nckap1P28660 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nckap1P28660 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.84□□□□□ -0.03
Nckap1P28660 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Nckap1P28660 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nckap1P28660 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Nckap1P28660 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nckap1P28660 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Nckap1P28660 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nckap1P28660 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.84□□□□□ -0.03
Nckap1P28660 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nckap1P28660 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.03
Nckap1P28660 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.83□□□□□ -0.03
Nckap1P28660 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.83□□□□□ -0.03
Nckap1P28660 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nckap1P28660 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nckap1P28660 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nckap1P28660 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.83□□□□□ -0.03
Nckap1P28660 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
Nckap1P28660 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nckap1P28660 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nckap1P28660 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nckap1P28660 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Nckap1P28660 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nckap1P28660 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.83□□□□□ -0.04
Nckap1P28660 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nckap1P28660 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nckap1P28660 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.83□□□□□ -0.04
Nckap1P28660 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nckap1P28660 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nckap1P28660 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Nckap1P28660 Gm9824-201ENSMUST00000178707 561 ntBASIC14.83□□□□□ -0.04
Nckap1P28660 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Nckap1P28660 Gm20949-201ENSMUST00000206478 952 ntBASIC14.83□□□□□ -0.04
Nckap1P28660 Gm5779-201ENSMUST00000218467 910 ntBASIC14.83□□□□□ -0.04
Nckap1P28660 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nckap1P28660 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
Nckap1P28660 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nckap1P28660 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.83□□□□□ -0.04
Nckap1P28660 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nckap1P28660 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Nckap1P28660 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nckap1P28660 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.83□□□□□ -0.04
Nckap1P28660 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nckap1P28660 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nckap1P28660 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nckap1P28660 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Nckap1P28660 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.82□□□□□ -0.04
Nckap1P28660 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nckap1P28660 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Nckap1P28660 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Nckap1P28660 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Nckap1P28660 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.82□□□□□ -0.04
Nckap1P28660 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.82□□□□□ -0.04
Nckap1P28660 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.82□□□□□ -0.04
Nckap1P28660 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nckap1P28660 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nckap1P28660 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Nckap1P28660 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nckap1P28660 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nckap1P28660 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nckap1P28660 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.82□□□□□ -0.04
Nckap1P28660 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nckap1P28660 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nckap1P28660 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.82□□□□□ -0.04
Nckap1P28660 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nckap1P28660 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nckap1P28660 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Nckap1P28660 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nckap1P28660 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nckap1P28660 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nckap1P28660 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.81□□□□□ -0.04
Nckap1P28660 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nckap1P28660 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nckap1P28660 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nckap1P28660 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Nckap1P28660 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms