Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ccl6P27784 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Ccl6P27784 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl6P27784 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl6P27784 AC157650.3-201ENSMUST00000225058 1476 ntBASIC11.64□□□□□ -0.55
Ccl6P27784 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl6P27784 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl6P27784 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Ccl6P27784 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl6P27784 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Ccl6P27784 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl6P27784 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl6P27784 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC11.64□□□□□ -0.55
Ccl6P27784 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.64□□□□□ -0.55
Ccl6P27784 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl6P27784 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl6P27784 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl6P27784 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Ccl6P27784 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl6P27784 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl6P27784 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl6P27784 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC11.64□□□□□ -0.55
Ccl6P27784 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Ccl6P27784 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl6P27784 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Ccl6P27784 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl6P27784 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl6P27784 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.64□□□□□ -0.55
Ccl6P27784 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl6P27784 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Ccl6P27784 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl6P27784 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl6P27784 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl6P27784 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccl6P27784 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl6P27784 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.63□□□□□ -0.55
Ccl6P27784 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl6P27784 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl6P27784 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl6P27784 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Ccl6P27784 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC11.63□□□□□ -0.55
Ccl6P27784 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl6P27784 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl6P27784 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl6P27784 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl6P27784 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Ccl6P27784 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl6P27784 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl6P27784 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl6P27784 Gm6184-201ENSMUST00000120403 1261 ntBASIC11.63□□□□□ -0.55
Ccl6P27784 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.63□□□□□ -0.55
Ccl6P27784 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl6P27784 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Ccl6P27784 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.63□□□□□ -0.55
Ccl6P27784 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Ccl6P27784 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.63□□□□□ -0.55
Ccl6P27784 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.63□□□□□ -0.55
Ccl6P27784 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl6P27784 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC11.63□□□□□ -0.55
Ccl6P27784 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC11.63□□□□□ -0.55
Ccl6P27784 AC133598.3-202ENSMUST00000224219 531 ntBASIC11.63□□□□□ -0.55
Ccl6P27784 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl6P27784 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl6P27784 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Ccl6P27784 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl6P27784 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Ccl6P27784 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Ccl6P27784 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl6P27784 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl6P27784 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccl6P27784 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Ccl6P27784 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Ccl6P27784 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl6P27784 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl6P27784 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl6P27784 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl6P27784 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Ccl6P27784 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl6P27784 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl6P27784 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl6P27784 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Ccl6P27784 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.62□□□□□ -0.55
Ccl6P27784 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl6P27784 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl6P27784 Gm18489-201ENSMUST00000172565 551 ntBASIC11.62□□□□□ -0.55
Ccl6P27784 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Ccl6P27784 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl6P27784 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC11.62□□□□□ -0.55
Ccl6P27784 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.62□□□□□ -0.55
Ccl6P27784 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.62□□□□□ -0.55
Ccl6P27784 Gm7787-201ENSMUST00000216858 688 ntBASIC11.62□□□□□ -0.55
Ccl6P27784 Mzt1-203ENSMUST00000227948 952 ntBASIC11.62□□□□□ -0.55
Ccl6P27784 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl6P27784 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl6P27784 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl6P27784 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl6P27784 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl6P27784 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl6P27784 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC11.62□□□□□ -0.55
Ccl6P27784 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms