Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Tnfrsf1bP25119 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfrsf1bP25119 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tnfrsf1bP25119 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Gm4995-201ENSMUST00000117247 432 ntBASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfrsf1bP25119 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Gm9385-201ENSMUST00000117563 472 ntBASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Tnfrsf1bP25119 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfrsf1bP25119 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Tnfrsf1bP25119 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfrsf1bP25119 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.79□□□□□ -0.2
Tnfrsf1bP25119 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfrsf1bP25119 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfrsf1bP25119 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfrsf1bP25119 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfrsf1bP25119 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.79□□□□□ -0.2
Tnfrsf1bP25119 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.79□□□□□ -0.2
Tnfrsf1bP25119 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.79□□□□□ -0.2
Tnfrsf1bP25119 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfrsf1bP25119 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfrsf1bP25119 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfrsf1bP25119 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfrsf1bP25119 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfrsf1bP25119 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Tnfrsf1bP25119 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfrsf1bP25119 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfrsf1bP25119 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms