Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Irf8P23611 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Irf8P23611 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Irf8P23611 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.06■□□□□ 0.16
Irf8P23611 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Irf8P23611 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Irf8P23611 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Irf8P23611 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Irf8P23611 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.06■□□□□ 0.16
Irf8P23611 Gm25911-201ENSMUST00000157621 56 ntBASIC16.06■□□□□ 0.16
Irf8P23611 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Irf8P23611 Gm20553-201ENSMUST00000204205 844 ntBASIC16.06■□□□□ 0.16
Irf8P23611 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.06■□□□□ 0.16
Irf8P23611 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.06■□□□□ 0.16
Irf8P23611 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Irf8P23611 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Irf8P23611 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.06■□□□□ 0.16
Irf8P23611 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
Irf8P23611 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Irf8P23611 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Irf8P23611 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.06■□□□□ 0.16
Irf8P23611 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Irf8P23611 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Irf8P23611 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Irf8P23611 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Irf8P23611 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Irf8P23611 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Irf8P23611 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Irf8P23611 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Irf8P23611 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Irf8P23611 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Irf8P23611 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.05■□□□□ 0.16
Irf8P23611 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.05■□□□□ 0.16
Irf8P23611 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.05■□□□□ 0.16
Irf8P23611 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Irf8P23611 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Irf8P23611 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Irf8P23611 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.05■□□□□ 0.16
Irf8P23611 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.05■□□□□ 0.16
Irf8P23611 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Irf8P23611 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Irf8P23611 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.05■□□□□ 0.16
Irf8P23611 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Irf8P23611 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Irf8P23611 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Irf8P23611 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.05■□□□□ 0.16
Irf8P23611 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.05■□□□□ 0.16
Irf8P23611 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Irf8P23611 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Irf8P23611 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.05■□□□□ 0.16
Irf8P23611 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Irf8P23611 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Irf8P23611 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Irf8P23611 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Irf8P23611 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Irf8P23611 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Irf8P23611 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.05■□□□□ 0.16
Irf8P23611 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Irf8P23611 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Irf8P23611 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Irf8P23611 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Irf8P23611 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Irf8P23611 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Irf8P23611 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.04■□□□□ 0.16
Irf8P23611 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.04■□□□□ 0.16
Irf8P23611 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.04■□□□□ 0.16
Irf8P23611 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Irf8P23611 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.04■□□□□ 0.16
Irf8P23611 Gm11025-201ENSMUST00000140773 466 ntBASIC16.04■□□□□ 0.16
Irf8P23611 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.04■□□□□ 0.16
Irf8P23611 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Irf8P23611 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.04■□□□□ 0.16
Irf8P23611 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Irf8P23611 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Irf8P23611 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Irf8P23611 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Irf8P23611 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Irf8P23611 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Irf8P23611 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Irf8P23611 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Irf8P23611 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Irf8P23611 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Irf8P23611 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Irf8P23611 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Irf8P23611 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Irf8P23611 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Irf8P23611 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.03■□□□□ 0.16
Irf8P23611 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Irf8P23611 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Irf8P23611 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.03■□□□□ 0.16
Irf8P23611 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Irf8P23611 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.03■□□□□ 0.16
Irf8P23611 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Irf8P23611 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Irf8P23611 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Irf8P23611 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Irf8P23611 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Irf8P23611 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Irf8P23611 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.03■□□□□ 0.16
Irf8P23611 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms