Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.23□□□□□ -0.45
Tnfrsf9P20334 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf9P20334 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Tnfrsf9P20334 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.23□□□□□ -0.45
Tnfrsf9P20334 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf9P20334 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf9P20334 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf9P20334 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf9P20334 Grk6-207ENSMUST00000225925 2769 ntBASIC12.23□□□□□ -0.45
Tnfrsf9P20334 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.23□□□□□ -0.45
Tnfrsf9P20334 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf9P20334 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf9P20334 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.23□□□□□ -0.45
Tnfrsf9P20334 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Gm8825-201ENSMUST00000182565 998 ntBASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Gm4518-201ENSMUST00000182638 718 ntBASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Gm27494-201ENSMUST00000184735 189 ntBASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Gm37153-201ENSMUST00000193637 231 ntBASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf9P20334 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf9P20334 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf9P20334 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf9P20334 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Tnfrsf9P20334 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Tnfrsf9P20334 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf9P20334 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf9P20334 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf9P20334 Mir1895-201ENSMUST00000122615 79 ntBASIC12.21□□□□□ -0.45
Tnfrsf9P20334 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.21□□□□□ -0.45
Tnfrsf9P20334 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf9P20334 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.21□□□□□ -0.45
Tnfrsf9P20334 Gm44335-201ENSMUST00000196879 141 ntBASIC12.21□□□□□ -0.45
Tnfrsf9P20334 Gm44297-201ENSMUST00000198304 141 ntBASIC12.21□□□□□ -0.45
Tnfrsf9P20334 Gm44346-201ENSMUST00000198851 141 ntBASIC12.21□□□□□ -0.45
Tnfrsf9P20334 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf9P20334 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms