Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn1P12960 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cntn1P12960 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
Cntn1P12960 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cntn1P12960 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn1P12960 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cntn1P12960 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn1P12960 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cntn1P12960 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cntn1P12960 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cntn1P12960 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn1P12960 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn1P12960 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Cntn1P12960 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn1P12960 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn1P12960 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Cntn1P12960 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn1P12960 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cntn1P12960 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn1P12960 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cntn1P12960 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.3□□□□□ -0.12
Cntn1P12960 Gm25925-201ENSMUST00000158314 306 ntBASIC14.3□□□□□ -0.12
Cntn1P12960 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cntn1P12960 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.3□□□□□ -0.12
Cntn1P12960 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Cntn1P12960 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.3□□□□□ -0.12
Cntn1P12960 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.3□□□□□ -0.12
Cntn1P12960 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cntn1P12960 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn1P12960 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cntn1P12960 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn1P12960 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cntn1P12960 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn1P12960 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn1P12960 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Cntn1P12960 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn1P12960 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn1P12960 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn1P12960 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn1P12960 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.3□□□□□ -0.12
Cntn1P12960 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn1P12960 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn1P12960 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cntn1P12960 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn1P12960 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn1P12960 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn1P12960 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn1P12960 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn1P12960 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn1P12960 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn1P12960 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cntn1P12960 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn1P12960 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cntn1P12960 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cntn1P12960 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.29□□□□□ -0.12
Cntn1P12960 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn1P12960 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn1P12960 Gm16026-204ENSMUST00000162652 683 ntBASIC14.29□□□□□ -0.12
Cntn1P12960 Gm18889-201ENSMUST00000174284 929 ntBASIC14.29□□□□□ -0.12
Cntn1P12960 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.29□□□□□ -0.12
Cntn1P12960 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.29□□□□□ -0.12
Cntn1P12960 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.29□□□□□ -0.12
Cntn1P12960 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Cntn1P12960 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Cntn1P12960 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn1P12960 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Cntn1P12960 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn1P12960 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
Cntn1P12960 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn1P12960 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn1P12960 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn1P12960 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn1P12960 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Cntn1P12960 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn1P12960 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.29□□□□□ -0.12
Cntn1P12960 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.29□□□□□ -0.12
Cntn1P12960 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn1P12960 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn1P12960 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn1P12960 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn1P12960 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn1P12960 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cntn1P12960 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.29□□□□□ -0.12
Cntn1P12960 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.29□□□□□ -0.12
Cntn1P12960 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn1P12960 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn1P12960 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn1P12960 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn1P12960 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn1P12960 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Cntn1P12960 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn1P12960 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.28□□□□□ -0.12
Cntn1P12960 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.28□□□□□ -0.12
Cntn1P12960 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn1P12960 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn1P12960 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cntn1P12960 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.28□□□□□ -0.12
Cntn1P12960 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.28□□□□□ -0.12
Cntn1P12960 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn1P12960 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms