Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ApoeP08226 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ApoeP08226 Gm15358-201ENSMUST00000119249 520 ntBASIC14.13□□□□□ -0.15
ApoeP08226 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ApoeP08226 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ApoeP08226 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ApoeP08226 Gm17808-201ENSMUST00000200859 894 ntBASIC14.13□□□□□ -0.15
ApoeP08226 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ApoeP08226 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.13□□□□□ -0.15
ApoeP08226 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.13□□□□□ -0.15
ApoeP08226 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.13□□□□□ -0.15
ApoeP08226 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ApoeP08226 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ApoeP08226 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ApoeP08226 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ApoeP08226 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ApoeP08226 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ApoeP08226 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ApoeP08226 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ApoeP08226 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.13□□□□□ -0.15
ApoeP08226 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ApoeP08226 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ApoeP08226 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
ApoeP08226 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ApoeP08226 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ApoeP08226 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ApoeP08226 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ApoeP08226 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ApoeP08226 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ApoeP08226 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ApoeP08226 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.12□□□□□ -0.15
ApoeP08226 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ApoeP08226 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ApoeP08226 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ApoeP08226 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ApoeP08226 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.12□□□□□ -0.15
ApoeP08226 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ApoeP08226 Gm4459-201ENSMUST00000118750 468 ntBASIC14.12□□□□□ -0.15
ApoeP08226 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ApoeP08226 Gm25745-201ENSMUST00000174945 133 ntBASIC14.12□□□□□ -0.15
ApoeP08226 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ApoeP08226 Gm43767-201ENSMUST00000198933 381 ntBASIC14.12□□□□□ -0.15
ApoeP08226 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ApoeP08226 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.12□□□□□ -0.15
ApoeP08226 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ApoeP08226 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.12□□□□□ -0.15
ApoeP08226 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
ApoeP08226 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ApoeP08226 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ApoeP08226 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ApoeP08226 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.12□□□□□ -0.15
ApoeP08226 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
ApoeP08226 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ApoeP08226 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ApoeP08226 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ApoeP08226 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ApoeP08226 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ApoeP08226 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ApoeP08226 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ApoeP08226 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ApoeP08226 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ApoeP08226 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ApoeP08226 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
ApoeP08226 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.12□□□□□ -0.15
ApoeP08226 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ApoeP08226 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.11□□□□□ -0.15
ApoeP08226 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ApoeP08226 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ApoeP08226 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
ApoeP08226 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ApoeP08226 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ApoeP08226 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ApoeP08226 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ApoeP08226 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
ApoeP08226 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
ApoeP08226 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ApoeP08226 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
ApoeP08226 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ApoeP08226 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ApoeP08226 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ApoeP08226 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.11□□□□□ -0.15
ApoeP08226 Gm29518-201ENSMUST00000190858 372 ntBASIC14.11□□□□□ -0.15
ApoeP08226 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.11□□□□□ -0.15
ApoeP08226 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.11□□□□□ -0.15
ApoeP08226 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ApoeP08226 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
ApoeP08226 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ApoeP08226 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ApoeP08226 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ApoeP08226 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ApoeP08226 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ApoeP08226 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ApoeP08226 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ApoeP08226 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ApoeP08226 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ApoeP08226 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ApoeP08226 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
ApoeP08226 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ApoeP08226 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
ApoeP08226 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms