Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Syn1O88935 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syn1O88935 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syn1O88935 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syn1O88935 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syn1O88935 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syn1O88935 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syn1O88935 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syn1O88935 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syn1O88935 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syn1O88935 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syn1O88935 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syn1O88935 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syn1O88935 Gm5566-201ENSMUST00000116118 459 ntBASIC15.3■□□□□ 0.04
Syn1O88935 Gm12957-201ENSMUST00000117835 377 ntBASIC15.3■□□□□ 0.04
Syn1O88935 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syn1O88935 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syn1O88935 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Syn1O88935 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Syn1O88935 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.3■□□□□ 0.04
Syn1O88935 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC15.3■□□□□ 0.04
Syn1O88935 Mir1982-201ENSMUST00000157368 74 ntBASIC15.3■□□□□ 0.04
Syn1O88935 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syn1O88935 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Syn1O88935 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syn1O88935 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.3■□□□□ 0.04
Syn1O88935 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syn1O88935 Gm18624-201ENSMUST00000220966 658 ntBASIC15.3■□□□□ 0.04
Syn1O88935 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.3■□□□□ 0.04
Syn1O88935 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syn1O88935 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syn1O88935 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syn1O88935 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syn1O88935 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syn1O88935 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Syn1O88935 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Syn1O88935 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syn1O88935 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syn1O88935 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syn1O88935 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syn1O88935 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syn1O88935 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.29■□□□□ 0.04
Syn1O88935 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Syn1O88935 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Syn1O88935 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Syn1O88935 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Syn1O88935 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Syn1O88935 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Syn1O88935 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Syn1O88935 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Syn1O88935 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Syn1O88935 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Syn1O88935 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.29■□□□□ 0.04
Syn1O88935 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Syn1O88935 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.29■□□□□ 0.04
Syn1O88935 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.29■□□□□ 0.04
Syn1O88935 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC15.29■□□□□ 0.04
Syn1O88935 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.29■□□□□ 0.04
Syn1O88935 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Syn1O88935 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Syn1O88935 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Syn1O88935 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC15.29■□□□□ 0.04
Syn1O88935 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Syn1O88935 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Syn1O88935 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Syn1O88935 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Syn1O88935 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Syn1O88935 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Syn1O88935 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Syn1O88935 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Syn1O88935 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Syn1O88935 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Syn1O88935 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Syn1O88935 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Syn1O88935 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Syn1O88935 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Syn1O88935 Gm14722-201ENSMUST00000118943 689 ntBASIC15.28■□□□□ 0.04
Syn1O88935 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC15.28■□□□□ 0.04
Syn1O88935 Mir6392-201ENSMUST00000184924 108 ntBASIC15.28■□□□□ 0.04
Syn1O88935 Gm43703-201ENSMUST00000200523 763 ntBASIC15.28■□□□□ 0.04
Syn1O88935 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.28■□□□□ 0.04
Syn1O88935 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC15.28■□□□□ 0.04
Syn1O88935 Gm5035-201ENSMUST00000215581 927 ntBASIC15.28■□□□□ 0.04
Syn1O88935 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Syn1O88935 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Syn1O88935 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Syn1O88935 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Syn1O88935 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Syn1O88935 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Syn1O88935 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.28■□□□□ 0.04
Syn1O88935 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Syn1O88935 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Syn1O88935 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Syn1O88935 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Syn1O88935 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.27■□□□□ 0.04
Syn1O88935 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Syn1O88935 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Syn1O88935 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Syn1O88935 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Syn1O88935 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms