Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CcnkO88874 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CcnkO88874 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CcnkO88874 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CcnkO88874 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CcnkO88874 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CcnkO88874 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CcnkO88874 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CcnkO88874 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CcnkO88874 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CcnkO88874 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CcnkO88874 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CcnkO88874 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CcnkO88874 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CcnkO88874 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CcnkO88874 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CcnkO88874 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
CcnkO88874 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CcnkO88874 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CcnkO88874 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.31□□□□□ -0.28
CcnkO88874 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CcnkO88874 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CcnkO88874 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CcnkO88874 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CcnkO88874 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CcnkO88874 Gm9172-201ENSMUST00000212092 954 ntBASIC13.31□□□□□ -0.28
CcnkO88874 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.31□□□□□ -0.28
CcnkO88874 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CcnkO88874 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.31□□□□□ -0.28
CcnkO88874 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CcnkO88874 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CcnkO88874 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CcnkO88874 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CcnkO88874 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CcnkO88874 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CcnkO88874 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CcnkO88874 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CcnkO88874 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CcnkO88874 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.31□□□□□ -0.28
CcnkO88874 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CcnkO88874 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CcnkO88874 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CcnkO88874 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CcnkO88874 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CcnkO88874 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
CcnkO88874 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CcnkO88874 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CcnkO88874 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CcnkO88874 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CcnkO88874 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CcnkO88874 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CcnkO88874 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CcnkO88874 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CcnkO88874 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CcnkO88874 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CcnkO88874 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CcnkO88874 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CcnkO88874 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.3□□□□□ -0.28
CcnkO88874 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.3□□□□□ -0.28
CcnkO88874 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CcnkO88874 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CcnkO88874 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CcnkO88874 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CcnkO88874 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CcnkO88874 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.3□□□□□ -0.28
CcnkO88874 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CcnkO88874 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.3□□□□□ -0.28
CcnkO88874 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CcnkO88874 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CcnkO88874 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CcnkO88874 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CcnkO88874 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.3□□□□□ -0.28
CcnkO88874 Efs-202ENSMUST00000227037 2540 ntBASIC13.3□□□□□ -0.28
CcnkO88874 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CcnkO88874 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
CcnkO88874 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CcnkO88874 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CcnkO88874 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CcnkO88874 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.29□□□□□ -0.28
CcnkO88874 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CcnkO88874 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CcnkO88874 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CcnkO88874 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CcnkO88874 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CcnkO88874 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.29□□□□□ -0.28
CcnkO88874 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CcnkO88874 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
CcnkO88874 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CcnkO88874 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.29□□□□□ -0.28
CcnkO88874 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CcnkO88874 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CcnkO88874 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CcnkO88874 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CcnkO88874 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CcnkO88874 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CcnkO88874 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CcnkO88874 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CcnkO88874 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
CcnkO88874 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CcnkO88874 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms