Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldn1O88551 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn1O88551 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn1O88551 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn1O88551 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn1O88551 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn1O88551 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn1O88551 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Cldn1O88551 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn1O88551 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn1O88551 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn1O88551 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cldn1O88551 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cldn1O88551 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn1O88551 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn1O88551 Gm6415-201ENSMUST00000118488 348 ntBASIC12.8□□□□□ -0.36
Cldn1O88551 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.8□□□□□ -0.36
Cldn1O88551 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cldn1O88551 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.8□□□□□ -0.36
Cldn1O88551 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.8□□□□□ -0.36
Cldn1O88551 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.8□□□□□ -0.36
Cldn1O88551 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn1O88551 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.8□□□□□ -0.36
Cldn1O88551 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn1O88551 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.8□□□□□ -0.36
Cldn1O88551 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn1O88551 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn1O88551 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn1O88551 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn1O88551 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn1O88551 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn1O88551 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cldn1O88551 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cldn1O88551 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.8□□□□□ -0.36
Cldn1O88551 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn1O88551 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.79□□□□□ -0.36
Cldn1O88551 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Cldn1O88551 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cldn1O88551 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn1O88551 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn1O88551 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn1O88551 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn1O88551 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn1O88551 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn1O88551 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cldn1O88551 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn1O88551 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cldn1O88551 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cldn1O88551 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn1O88551 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn1O88551 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.79□□□□□ -0.36
Cldn1O88551 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn1O88551 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cldn1O88551 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.79□□□□□ -0.36
Cldn1O88551 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn1O88551 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn1O88551 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn1O88551 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn1O88551 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cldn1O88551 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.79□□□□□ -0.36
Cldn1O88551 Gm10154-201ENSMUST00000084445 354 ntBASIC12.79□□□□□ -0.36
Cldn1O88551 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn1O88551 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn1O88551 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cldn1O88551 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn1O88551 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn1O88551 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cldn1O88551 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn1O88551 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn1O88551 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn1O88551 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn1O88551 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.79□□□□□ -0.36
Cldn1O88551 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn1O88551 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn1O88551 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cldn1O88551 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cldn1O88551 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.78□□□□□ -0.36
Cldn1O88551 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.78□□□□□ -0.36
Cldn1O88551 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cldn1O88551 Gm15693-201ENSMUST00000120470 637 ntBASIC12.78□□□□□ -0.36
Cldn1O88551 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.78□□□□□ -0.36
Cldn1O88551 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.78□□□□□ -0.36
Cldn1O88551 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.78□□□□□ -0.36
Cldn1O88551 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.78□□□□□ -0.36
Cldn1O88551 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Gm7653-201ENSMUST00000214567 508 ntBASIC12.78□□□□□ -0.36
Cldn1O88551 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms