Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cops3O88543 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cops3O88543 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cops3O88543 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cops3O88543 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cops3O88543 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cops3O88543 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cops3O88543 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cops3O88543 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cops3O88543 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cops3O88543 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cops3O88543 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cops3O88543 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.39□□□□□ -0.27
Cops3O88543 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.39□□□□□ -0.27
Cops3O88543 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Cops3O88543 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Cops3O88543 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cops3O88543 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cops3O88543 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cops3O88543 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cops3O88543 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cops3O88543 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cops3O88543 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Cops3O88543 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.39□□□□□ -0.27
Cops3O88543 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cops3O88543 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Cops3O88543 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cops3O88543 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cops3O88543 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cops3O88543 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cops3O88543 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cops3O88543 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cops3O88543 Carlr-201ENSMUST00000181515 2574 ntBASIC13.39□□□□□ -0.27
Cops3O88543 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cops3O88543 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cops3O88543 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Cops3O88543 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cops3O88543 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cops3O88543 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cops3O88543 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cops3O88543 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cops3O88543 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cops3O88543 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cops3O88543 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cops3O88543 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cops3O88543 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cops3O88543 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cops3O88543 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cops3O88543 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cops3O88543 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cops3O88543 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cops3O88543 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cops3O88543 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cops3O88543 Gm12895-201ENSMUST00000122214 226 ntBASIC13.38□□□□□ -0.27
Cops3O88543 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.38□□□□□ -0.27
Cops3O88543 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.38□□□□□ -0.27
Cops3O88543 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cops3O88543 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cops3O88543 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.38□□□□□ -0.27
Cops3O88543 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cops3O88543 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cops3O88543 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cops3O88543 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cops3O88543 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cops3O88543 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cops3O88543 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cops3O88543 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cops3O88543 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cops3O88543 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cops3O88543 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cops3O88543 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cops3O88543 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cops3O88543 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cops3O88543 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cops3O88543 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cops3O88543 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cops3O88543 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Cops3O88543 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cops3O88543 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cops3O88543 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Cops3O88543 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cops3O88543 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.37□□□□□ -0.27
Cops3O88543 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cops3O88543 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cops3O88543 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cops3O88543 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cops3O88543 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Cops3O88543 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cops3O88543 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cops3O88543 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cops3O88543 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cops3O88543 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cops3O88543 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cops3O88543 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cops3O88543 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cops3O88543 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.37□□□□□ -0.27
Cops3O88543 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cops3O88543 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cops3O88543 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Cops3O88543 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms